RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 ZSCAN12O43309 604 aa22.14■■□□□ 1.13
MBD3-209ENST00000592012 RAD21O60216 631 aa22.14■■□□□ 1.13
MBD3-209ENST00000592012 COPB1P53618 953 aaKnown RBP22.14■■□□□ 1.13
MBD3-209ENST00000592012 TMEM179Q6ZVK1 233 aa22.14■■□□□ 1.13
MBD3-209ENST00000592012 PPFIBP1Q86W92 1011 aa22.14■■□□□ 1.13
MBD3-209ENST00000592012 SUPT20HQ8NEM7 779 aa22.14■■□□□ 1.13
MBD3-209ENST00000592012 STK32BQ9NY57 414 aa22.14■■□□□ 1.13
MBD3-209ENST00000592012 MYH7BA7E2Y1 1941 aa22.14■■□□□ 1.13
MBD3-209ENST00000592012 PPIP5K2O43314 1243 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 C21orf2O43822 256 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 ETF1P62495 437 aaKnown RBP22.13■■□□□ 1.13
MBD3-209ENST00000592012 GRB10Q13322 594 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 STIM1Q13586 685 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 QRICH1Q2TAL8 776 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 TRIM65Q6PJ69 517 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 VPS16Q9H269 839 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 ATF5Q9Y2D1 282 aaPredicted RBP22.13■■□□□ 1.13
MBD3-209ENST00000592012 ATRNL1Q5VV63 1379 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 ENTPD3O75355 529 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 AMPD3Q01432 767 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 ICA1Q05084 483 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 SYCP1Q15431 976 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 TMEM266Q2M3C6 531 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 ANKRD20A12PQ8NF67 263 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 ANKRD7Q92527 254 aa22.13■■□□□ 1.13
MBD3-209ENST00000592012 PSMA7O14818 248 aa22.12■■□□□ 1.13
MBD3-209ENST00000592012 ABCB5Q2M3G0 1257 aa22.12■■□□□ 1.13
MBD3-209ENST00000592012 CPLX3Q8WVH0 158 aa22.12■■□□□ 1.13
MBD3-209ENST00000592012 PNMA5Q96PV4 448 aa22.12■■□□□ 1.13
MBD3-209ENST00000592012 BLOC1S4Q9NUP1 217 aa22.12■■□□□ 1.13
MBD3-209ENST00000592012 GDF11O95390 407 aa22.12■■□□□ 1.13
MBD3-209ENST00000592012 TOGARAM2Q6ZUX3 1019 aa22.12■■□□□ 1.13
MBD3-209ENST00000592012 DHTKD1Q96HY7 919 aaPredicted RBP22.12■■□□□ 1.13
MBD3-209ENST00000592012 RAB34Q9BZG1 259 aa22.12■■□□□ 1.13
MBD3-209ENST00000592012 TAB2Q9NYJ8 693 aa22.12■■□□□ 1.13
MBD3-209ENST00000592012 PCDHA1Q9Y5I3 950 aa22.12■■□□□ 1.13
MBD3-209ENST00000592012 POTEMA6NI47 508 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 F5H6K3 240 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 GYPCP04921 128 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 ASIC1P78348 528 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 KLRC3Q07444 240 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 PDE4DQ08499 809 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 NCBP1Q09161 790 aaKnown RBP22.11■■□□□ 1.13
MBD3-209ENST00000592012 STK4Q13043 487 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 TTI2Q6NXR4 508 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 HAS1Q92839 578 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 DDX25Q9UHL0 483 aaKnown RBP22.11■■□□□ 1.13
MBD3-209ENST00000592012 CASP14P31944 242 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 JAG1P78504 1218 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 CREBRFQ8IUR6 639 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 CCDC47Q96A33 483 aaKnown RBP22.11■■□□□ 1.13
MBD3-209ENST00000592012 GLT8D2Q9H1C3 349 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 L2HGDHQ9H9P8 463 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 STK17AQ9UEE5 414 aa22.11■■□□□ 1.13
MBD3-209ENST00000592012 USP17L15C9J2P7 530 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 USP17L13C9JLJ4 530 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 USP17L11C9JVI0 530 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 USP17L18D6R9N7 530 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 USP17L22D6RA61 530 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 USP17L17D6RBQ6 530 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 USP17L19D6RCP7 530 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 USP17L20D6RJB6 530 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 MFAP3LO75121 409 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 USP17L24Q0WX57 530 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 CDC37Q16543 378 aaPredicted RBP22.1■■□□□ 1.13
MBD3-209ENST00000592012 USP17L6PQ6QN14 398 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 SV2BQ7L1I2 683 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 GMCL1P1Q8NEA9 526 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 THAP9Q9H5L6 903 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 EXOC1Q9NV70 894 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 FXR1P51114 621 aaKnown RBP eCLIP22.1■■□□□ 1.13
MBD3-209ENST00000592012 NUDT12Q9BQG2 462 aa22.1■■□□□ 1.13
MBD3-209ENST00000592012 NAA15Q9BXJ9 866 aaKnown RBP22.1■■□□□ 1.13
MBD3-209ENST00000592012 SRRTQ9BXP5 876 aaKnown RBP22.1■■□□□ 1.13
MBD3-209ENST00000592012 ZNF215Q9UL58 517 aaPredicted RBP22.1■■□□□ 1.13
MBD3-209ENST00000592012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.1■■□□□ 1.134e-6■■□□□ 12.6
MBD3-209ENST00000592012 FCER1AP12319 257 aa22.09■■□□□ 1.13
MBD3-209ENST00000592012 GCFC2P16383 781 aaKnown RBP22.09■■□□□ 1.13
MBD3-209ENST00000592012 NAA30Q147X3 362 aaPredicted RBP22.09■■□□□ 1.13
MBD3-209ENST00000592012 CNGA4Q8IV77 575 aa22.09■■□□□ 1.13
MBD3-209ENST00000592012 PDGFDQ9GZP0 370 aaPredicted RBP22.09■■□□□ 1.13
MBD3-209ENST00000592012 EEF1GP26641 437 aaKnown RBP22.09■■□□□ 1.13
MBD3-209ENST00000592012 RRP1BQ14684 758 aaKnown RBP22.09■■□□□ 1.13
MBD3-209ENST00000592012 KRT79Q5XKE5 535 aa22.09■■□□□ 1.13
MBD3-209ENST00000592012 LARP4BQ92615 738 aaKnown RBP22.09■■□□□ 1.13
MBD3-209ENST00000592012 GMCL1Q96IK5 515 aa22.09■■□□□ 1.13
MBD3-209ENST00000592012 TRIM47Q96LD4 638 aa22.09■■□□□ 1.13
MBD3-209ENST00000592012 CSRNP1Q96S65 589 aa22.09■■□□□ 1.13
MBD3-209ENST00000592012 DUSP9Q99956 384 aaKnown RBP22.09■■□□□ 1.13
MBD3-209ENST00000592012 GTPBP4Q9BZE4 634 aaKnown RBP22.09■■□□□ 1.13
MBD3-209ENST00000592012 DNAI1Q9UI46 699 aa22.09■■□□□ 1.13
MBD3-209ENST00000592012 PHLPP2Q6ZVD8 1323 aa22.08■■□□□ 1.13
MBD3-209ENST00000592012 GOLGA6L9A6NEM1 432 aa22.08■■□□□ 1.13
MBD3-209ENST00000592012 SOWAHDA6NJG2 315 aa22.08■■□□□ 1.13
MBD3-209ENST00000592012 NDUFB10O96000 172 aa22.08■■□□□ 1.13
MBD3-209ENST00000592012 GH2P01242 217 aa22.08■■□□□ 1.13
MBD3-209ENST00000592012 MCM6Q14566 821 aa22.08■■□□□ 1.13
MBD3-209ENST00000592012 MTF1Q14872 753 aa22.08■■□□□ 1.13
MBD3-209ENST00000592012 CCDC93Q567U6 631 aa22.08■■□□□ 1.13
MBD3-209ENST00000592012 CDK5RAP3Q96JB5 506 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms