RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, human

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00662-208	ENST00000591338	NOM1	Q5C9Z4	860 aa	Known RBP	13.65	□□□□□ -0.22
LINC00662-208	ENST00000591338	MYSM1	Q5VVJ2	828 aa		13.65	□□□□□ -0.22
LINC00662-208	ENST00000591338	RASAL3	Q86YV0	1011 aa		13.65	□□□□□ -0.22
LINC00662-208	ENST00000591338	REPS2	Q8NFH8	660 aa		13.65	□□□□□ -0.22
LINC00662-208	ENST00000591338	BICD2	Q8TD16	824 aa		13.65	□□□□□ -0.22
LINC00662-208	ENST00000591338	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.65	□□□□□ -0.22
LINC00662-208	ENST00000591338	BIN2	Q9UBW5	565 aa	Predicted RBP	13.65	□□□□□ -0.22
LINC00662-208	ENST00000591338	PNMA2	Q9UL42	364 aa		13.65	□□□□□ -0.22
LINC00662-208	ENST00000591338	CCPG1	Q9ULG6	757 aa		13.65	□□□□□ -0.22
LINC00662-208	ENST00000591338	MRPL11	Q9Y3B7	192 aa	Known RBP	13.65	□□□□□ -0.22
LINC00662-208	ENST00000591338	ABCB11	O95342	1321 aa		13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	OPLAH	O14841	1288 aa		13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	OAZ1	P54368	228 aa		13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	IRX3	P78415	501 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	EARS2	Q5JPH6	523 aa	Known RBP	13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	ATL3	Q6DD88	541 aa		13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	POTEE	Q6S8J3	1075 aa		13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	RASGRP4	Q8TDF6	673 aa		13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	BRI3BP	Q8WY22	251 aa		13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	CUL5	Q93034	780 aa		13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	ZNF396	Q96N95	335 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	GLT8D2	Q9H1C3	349 aa		13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	ABT1	Q9ULW3	272 aa	Known RBP	13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	CNPY2	Q9Y2B0	182 aa		13.64	□□□□□ -0.23
LINC00662-208	ENST00000591338	MYH15	Q9Y2K3	1946 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	COL11A1	P12107	1806 aa	Predicted RBP	13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	TESPA1	A2RU30	521 aa	Predicted RBP	13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	FAM205C	A6NFA0	338 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	BTBD19	C9JJ37	291 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	MEIS2	O14770	477 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	ATP2A1	O14983	1001 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	SLC10A3	P09131	477 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	ALAS1	P13196	640 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	NCL	P19338	710 aa	Known RBP	13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	MCM4	P33991	863 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	CLK2	P49760	499 aa	Known RBP	13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	TOB1	P50616	345 aa	Predicted RBP	13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	HERVK_113	P62684	666 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	KRT85	P78386	507 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	TMEM132B	Q14DG7	1078 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	JAKMIP3	Q5VZ66	844 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	LBX2	Q6XYB7	198 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	PIK3AP1	Q6ZUJ8	805 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	ANKRD23	Q86SG2	305 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	REXO1	Q8N1G1	1221 aa	Known RBP	13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	TBC1D5	Q92609	795 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	CCDC102A	Q96A19	550 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	HHIPL1	Q96JK4	782 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	USP28	Q96RU2	1077 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	PTPN18	Q99952	460 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	TMEM260	Q9NX78	707 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	CFAP45	Q9UL16	551 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	ZNF214	Q9UL59	606 aa	Predicted RBP	13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	SLC45A1	Q9Y2W3	748 aa		13.63	□□□□□ -0.23
LINC00662-208	ENST00000591338	CCDC194	A0A1B0GVG4	234 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	FAM155A	B1AL88	458 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	PDHX	O00330	501 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	STAT3	P40763	770 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	CEBPZ	Q03701	1054 aa	Known RBP	13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	NFKBIB	Q15653	356 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	UBE2S	Q16763	222 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	RILPL1	Q5EBL4	403 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	USP17L6P	Q6QN14	398 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	KRT25	Q7Z3Z0	450 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	MB21D1	Q8N884	522 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	TMC2	Q8TDI7	906 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	CLEC4D	Q8WXI8	215 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	BTBD7	Q9P203	1132 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	RIPK3	Q9Y572	518 aa		13.62	□□□□□ -0.23
LINC00662-208	ENST00000591338	C2orf72	A6NCS6	295 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	MANSC4	A6NHS7	340 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	PIK3CD	O00329	1044 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	CFB	P00751	764 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	HOXB1	P14653	301 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	ATP2B1	P20020	1258 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	PLS1	Q14651	629 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	NONO	Q15233	471 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	TKFC	Q3LXA3	575 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	MUM1L1	Q5H9M0	696 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	ANO1	Q5XXA6	986 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	MCTP2	Q6DN12	878 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	SNRNP48	Q6IEG0	339 aa	Known RBP	13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	TEX2	Q8IWB9	1127 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	FAM43A	Q8N2R8	423 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	TRERF1	Q96PN7	1200 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	TEX13B	Q9BXU2	312 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	GDPD2	Q9HCC8	539 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	RTEL1	Q9NZ71	1219 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	RBPJL	Q9UBG7	517 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	RCOR1	Q9UKL0	485 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	PNMA3	Q9UL41	463 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	NOL7	Q9UMY1	257 aa	Known RBP	13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	CLIC4	Q9Y696	253 aa		13.61	□□□□□ -0.23
LINC00662-208	ENST00000591338	GOLGA6L22	H0YM25	854 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	PEX10	O60683	326 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	PRPF40A	O75400	957 aa	Known RBP	13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	CNMD	O75829	334 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms