RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 TMC6Q7Z403 805 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 CCDC12Q8WUD4 166 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ERCC4Q92889 916 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 KIAA1683Q9H0B3 1180 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PCDHA4Q9UN74 947 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 hCG_1984214I3L0E3 225 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PPP1R11O60927 126 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 NF2P35240 595 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 STAT2P52630 851 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 MAP3K9P80192 1104 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 DGKZQ13574 1117 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 MTMR2Q13614 643 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 UTP14CQ5TAP6 766 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 BLIDQ8IZY5 108 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ZNF713Q8N859 430 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 CNNM3Q8NE01 707 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 WDR18Q9BV38 432 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 OGFRQ9NZT2 677 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ZHX2Q9Y6X8 837 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 OTOFQ9HC10 1997 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PTPREP23469 700 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SNAP25P60880 206 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 MDM2Q00987 491 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 CDC37Q16543 378 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 QRICH1Q2TAL8 776 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 EARS2Q5JPH6 523 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ARMCX5Q6P1M9 558 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 MLKLQ8NB16 471 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ZNF280CQ8ND82 737 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 TNFRSF25Q93038 417 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ZMYND12Q9H0C1 365 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 HSD3B7Q9H2F3 369 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 L2HGDHQ9H9P8 463 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PRR12Q9ULL5 1215 aa16.94■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PAPPA2Q9BXP8 1791 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 FAM205CA6NFA0 338 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SMCO2A6NFE2 343 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 USP27XA6NNY8 438 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 IREB2P48200 963 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 UBASH3AP57075 661 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 VGLL4Q14135 290 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 NOM1Q5C9Z4 860 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 E4F1Q66K89 784 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 GTPBP4Q9BZE4 634 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 TMX1Q9H3N1 280 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 A0A087WWV3 80 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 TRIM75PA6NK02 468 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 BIN1O00499 593 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SLU7O95391 586 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 BMP15O95972 392 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 TOB1P50616 345 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 USP14P54578 494 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 BACE1P56817 501 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 MAP1SQ66K74 1059 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 GALNT17Q6IS24 598 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 DAGLBQ8NCG7 672 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 RASGRP4Q8TDF6 673 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 CHURC1Q8WUH1 139 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 LPAR1Q92633 364 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 C6orf50Q9HD87 102 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SNCAIPQ9Y6H5 919 aa16.93■□□□□ 0.3
CDK5RAP3-236ENST00000584991 WDR46O15213 610 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 LONRF3Q496Y0 759 aa16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SAMD1Q6SPF0 538 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 MOB2Q70IA6 237 aa16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 VSTM4Q8IW00 320 aa16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ZNF592Q92610 1267 aa16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 KIFC2Q96AC6 838 aa16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 FBXO28Q9NVF7 368 aa16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 FEM1BQ9UK73 627 aa16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SRPRBQ9Y5M8 271 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 CSADQ9Y600 493 aa16.92■□□□□ 0.3
CDK5RAP3-236ENST00000584991 GOLGA6L9A6NEM1 432 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PLA2G6O60733 806 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SERPINC1P01008 464 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ATP2B1P20020 1258 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 GNA11P29992 359 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SARSP49591 514 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PIK3AP1Q6ZUJ8 805 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 FAM160B2Q86V87 743 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ZNF397Q8NF99 534 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PPP1R13BQ96KQ4 1090 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SRRTQ9BXP5 876 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PCDHA6Q9UN73 950 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PCDHA8Q9Y5H6 950 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PCDHA5Q9Y5H7 936 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PHLPP2Q6ZVD8 1323 aa16.91■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ESYT2A0FGR8 921 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 M0R2N6 131 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ZSCAN12O43309 604 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PNOCQ13519 176 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PPP1R18Q6NYC8 613 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ENOX1Q8TC92 643 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 FBXO2Q9UK22 296 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 AFG3L2Q9Y4W6 797 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 PCDHA1Q9Y5I3 950 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms