RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 TAPT1Q6NXT6 567 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 PSRC1Q6PGN9 363 aaPredicted RBP12.78□□□□□ -0.36
PGAP3-209ENST00000584620 BTNL9Q6UXG8 535 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 OTOP2Q7RTS6 562 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 RANBP17Q9H2T7 1088 aaKnown RBP12.78□□□□□ -0.36
PGAP3-209ENST00000584620 SPC25Q9HBM1 224 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 CD320Q9NPF0 282 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 PDGFCQ9NRA1 345 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 MTMR7Q9Y216 660 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 LRRC37A2A6NM11 1700 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 REV3LO60673 3130 aa12.77□□□□□ -0.36
PGAP3-209ENST00000584620 CHD9Q3L8U1 2897 aa12.77□□□□□ -0.36
PGAP3-209ENST00000584620 A0A0U1RQG5 324 aaPredicted RBP12.77□□□□□ -0.37
PGAP3-209ENST00000584620 ASB14A6NK59 587 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 PI4K2BG5E9Z4 385 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 FGBP02675 491 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 ICAM1P05362 532 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 HSPD1P10809 573 aaKnown RBP12.77□□□□□ -0.37
PGAP3-209ENST00000584620 SMPD1P17405 629 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 CYP2C18P33260 490 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 SLC16A2P36021 539 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 NMIQ13287 307 aaPredicted RBP12.77□□□□□ -0.37
PGAP3-209ENST00000584620 FAM126BQ8IXS8 530 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 SLC43A3Q8NBI5 491 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 DCAF4Q8WV16 495 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 VTI1AQ96AJ9 217 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 UIMC1Q96RL1 719 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 TMEM47Q9BQJ4 181 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 CERS4Q9HA82 394 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 CCPG1Q9ULG6 757 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 MTCH2Q9Y6C9 303 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 MYH4Q9Y623 1939 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 GRIN2DO15399 1336 aa12.77□□□□□ -0.37
PGAP3-209ENST00000584620 CD4P01730 458 aa12.76□□□□□ -0.37
PGAP3-209ENST00000584620 CCDC96Q2M329 555 aa12.76□□□□□ -0.37
PGAP3-209ENST00000584620 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
PGAP3-209ENST00000584620 CXCL17Q6UXB2 119 aa12.76□□□□□ -0.37
PGAP3-209ENST00000584620 EEPD1Q7L9B9 569 aa12.76□□□□□ -0.37
PGAP3-209ENST00000584620 TLK2Q86UE8 772 aa12.76□□□□□ -0.37
PGAP3-209ENST00000584620 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
PGAP3-209ENST00000584620 FBXO16Q8IX29 292 aaPredicted RBP12.76□□□□□ -0.37
PGAP3-209ENST00000584620 MORC4Q8TE76 937 aa12.76□□□□□ -0.37
PGAP3-209ENST00000584620 LNPKQ9C0E8 428 aa12.76□□□□□ -0.37
PGAP3-209ENST00000584620 IL23AQ9NPF7 189 aa12.76□□□□□ -0.37
PGAP3-209ENST00000584620 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
PGAP3-209ENST00000584620 MROH7Q68CQ1 1323 aa12.76□□□□□ -0.37
PGAP3-209ENST00000584620 XIRP2A4UGR9 3374 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 NFIBO00712 420 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 DYNC1LI2O43237 492 aaPredicted RBP12.75□□□□□ -0.37
PGAP3-209ENST00000584620 ZMYM6O95789 1325 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 PDHBP11177 359 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 TOP1P11387 765 aaKnown RBP12.75□□□□□ -0.37
PGAP3-209ENST00000584620 HAND2P61296 217 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 NHLH1Q02575 133 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 BAATQ14032 418 aaPredicted RBP12.75□□□□□ -0.37
PGAP3-209ENST00000584620 FSCN1Q16658 493 aaKnown RBP12.75□□□□□ -0.37
PGAP3-209ENST00000584620 SYDE2Q5VT97 1194 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 FRMPD2Q68DX3 1309 aaPredicted RBP12.75□□□□□ -0.37
PGAP3-209ENST00000584620 NSMFQ6X4W1 530 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 NOL8Q76FK4 1167 aaKnown RBP12.75□□□□□ -0.37
PGAP3-209ENST00000584620 TBC1D10CQ8IV04 446 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 GPCPD1Q9NPB8 672 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 TOMM22Q9NS69 142 aa12.75□□□□□ -0.37
PGAP3-209ENST00000584620 CHD7Q9P2D1 2997 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 UMODL1Q5DID0 1318 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 CCDC171Q6TFL3 1326 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 EPOPA6NHQ4 379 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
PGAP3-209ENST00000584620 SNHG28P0DPA3 235 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 IQSEC1Q6DN90 963 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 CLEC4DQ8WXI8 215 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 HLA-CQ95604 372 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 MTIF3Q9H2K0 278 aaKnown RBP12.74□□□□□ -0.37
PGAP3-209ENST00000584620 VTA1Q9NP79 307 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 COG5Q9UP83 839 aa12.74□□□□□ -0.37
PGAP3-209ENST00000584620 PRR33A8MZF0 331 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 CABYRO75952 493 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 IGHDP01880 384 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 ALDH5A1P51649 535 aaPredicted RBP12.73□□□□□ -0.37
PGAP3-209ENST00000584620 ZNF543Q08ER8 600 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 ITGA7Q13683 1181 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 SLC30A10Q6XR72 485 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 PLEKHM2Q8IWE5 1019 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 YTHDC1Q96MU7 727 aaKnown RBP12.73□□□□□ -0.37
PGAP3-209ENST00000584620 AP5M1Q9H0R1 490 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 Q9Y3F1 56 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 PCDHA11Q9Y5I1 949 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 SLC4A7Q9Y6M7 1214 aa12.73□□□□□ -0.37
PGAP3-209ENST00000584620 MCM3APO60318 1980 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 NEDD4P46934 1319 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
PGAP3-209ENST00000584620 TRIM6-TRIM34B2RNG4 842 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 TLR3O15455 904 aaKnown RBP12.72□□□□□ -0.37
PGAP3-209ENST00000584620 SDSP20132 328 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 CCL23P55773 120 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 PSMC6P62333 389 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 DUSP28Q4G0W2 176 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 B4GALNT3Q6L9W6 998 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms