RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TBC1D10CQ8IV04 446 aa18.43■□□□□ 0.54
SKA2-209ENST00000583976 ZNF576Q9H609 170 aa18.43■□□□□ 0.54
SKA2-209ENST00000583976 DIAPH3Q9NSV4 1193 aa18.43■□□□□ 0.54
SKA2-209ENST00000583976 CXXC1Q9P0U4 656 aaPredicted RBP18.43■□□□□ 0.54
SKA2-209ENST00000583976 REV3LO60673 3130 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 TLR3O15455 904 aaKnown RBP18.42■□□□□ 0.54
SKA2-209ENST00000583976 B4GALT4O60513 344 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 ALDH5A1P51649 535 aaPredicted RBP18.42■□□□□ 0.54
SKA2-209ENST00000583976 ITGA7Q13683 1181 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 PPP4R3BQ5MIZ7 849 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 CWC27Q6UX04 472 aaKnown RBP18.42■□□□□ 0.54
SKA2-209ENST00000583976 TMEM199Q8N511 208 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 SLC43A3Q8NBI5 491 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 TMEM47Q9BQJ4 181 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 TRPV6Q9H1D0 765 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 WNT8AQ9H1J5 351 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 HIPK3Q9H422 1215 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 GPCPD1Q9NPB8 672 aa18.42■□□□□ 0.54
SKA2-209ENST00000583976 TANC1Q9C0D5 1861 aa18.41■□□□□ 0.54
SKA2-209ENST00000583976 FGAP02671 866 aa18.41■□□□□ 0.54
SKA2-209ENST00000583976 FGRP09769 529 aa18.41■□□□□ 0.54
SKA2-209ENST00000583976 CCL23P55773 120 aa18.41■□□□□ 0.54
SKA2-209ENST00000583976 BAATQ14032 418 aaPredicted RBP18.41■□□□□ 0.54
SKA2-209ENST00000583976 PSRC1Q6PGN9 363 aaPredicted RBP18.41■□□□□ 0.54
SKA2-209ENST00000583976 PPP1R13LQ8WUF5 828 aa18.41■□□□□ 0.54
SKA2-209ENST00000583976 AP5M1Q9H0R1 490 aa18.41■□□□□ 0.54
SKA2-209ENST00000583976 PRDM6Q9NQX0 595 aa18.41■□□□□ 0.54
SKA2-209ENST00000583976 HELLSQ9NRZ9 838 aa18.41■□□□□ 0.54
SKA2-209ENST00000583976 NEDD4P46934 1319 aa18.41■□□□□ 0.54
SKA2-209ENST00000583976 HIP1O00291 1037 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 PDHBP11177 359 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 TOP1P11387 765 aaKnown RBP18.4■□□□□ 0.54
SKA2-209ENST00000583976 ALX1Q15699 326 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 MCMDC2Q4G0Z9 681 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 BTNL9Q6UXG8 535 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 MORC4Q8TE76 937 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 CLEC4DQ8WXI8 215 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 NOC4LQ9BVI4 516 aaKnown RBP18.4■□□□□ 0.54
SKA2-209ENST00000583976 PRDM12Q9H4Q4 367 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 VTA1Q9NP79 307 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 IL23AQ9NPF7 189 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 SCN5AQ14524 2016 aa18.4■□□□□ 0.54
SKA2-209ENST00000583976 PTPDC1A2A3K4 754 aa18.39■□□□□ 0.53
SKA2-209ENST00000583976 HSPD1P10809 573 aaKnown RBP18.39■□□□□ 0.53
SKA2-209ENST00000583976 KIAA1211Q6ZU35 1233 aa18.39■□□□□ 0.53
SKA2-209ENST00000583976 TICAM2Q86XR7 235 aa18.39■□□□□ 0.53
SKA2-209ENST00000583976 CPVLQ9H3G5 476 aa18.39■□□□□ 0.53
SKA2-209ENST00000583976 ZMYM6O95789 1325 aa18.39■□□□□ 0.53
SKA2-209ENST00000583976 SCN10AQ9Y5Y9 1956 aa18.39■□□□□ 0.53
SKA2-209ENST00000583976 CABYRO75952 493 aa18.38■□□□□ 0.53
SKA2-209ENST00000583976 CALML3P27482 149 aa18.38■□□□□ 0.53
SKA2-209ENST00000583976 BMP2KLQ5H9B9 411 aa18.38■□□□□ 0.53
SKA2-209ENST00000583976 OTOP2Q7RTS6 562 aa18.38■□□□□ 0.53
SKA2-209ENST00000583976 VWCEQ96DN2 955 aa18.38■□□□□ 0.53
SKA2-209ENST00000583976 SCLYQ96I15 445 aa18.38■□□□□ 0.53
SKA2-209ENST00000583976 TRMT13Q9NUP7 481 aaKnown RBP18.38■□□□□ 0.53
SKA2-209ENST00000583976 YBX2Q9Y2T7 364 aaKnown RBP18.38■□□□□ 0.53
SKA2-209ENST00000583976 XIRP2A4UGR9 3374 aa18.38■□□□□ 0.53
SKA2-209ENST00000583976 CHMLP26374 656 aa18.37■□□□□ 0.53
SKA2-209ENST00000583976 ZNF543Q08ER8 600 aa18.37■□□□□ 0.53
SKA2-209ENST00000583976 DUSP28Q4G0W2 176 aa18.37■□□□□ 0.53
SKA2-209ENST00000583976 IQSEC1Q6DN90 963 aa18.37■□□□□ 0.53
SKA2-209ENST00000583976 HERVK_113Q902F9 699 aa18.37■□□□□ 0.53
SKA2-209ENST00000583976 ZKSCAN3Q9BRR0 538 aa18.37■□□□□ 0.53
SKA2-209ENST00000583976 NKX2-4Q9H2Z4 354 aa18.37■□□□□ 0.53
SKA2-209ENST00000583976 GTF3C3Q9Y5Q9 886 aa18.37■□□□□ 0.53
SKA2-209ENST00000583976 RBAK-RBAKDNI3L0D1 243 aa18.36■□□□□ 0.53
SKA2-209ENST00000583976 GOLGA8HP0CJ92 632 aa18.36■□□□□ 0.53
SKA2-209ENST00000583976 CYP2C9P11712 490 aa18.36■□□□□ 0.53
SKA2-209ENST00000583976 MYO9BQ13459 2157 aa18.36■□□□□ 0.53
SKA2-209ENST00000583976 ADGRE1Q14246 886 aa18.36■□□□□ 0.53
SKA2-209ENST00000583976 OR6J1Q8NGC5 347 aa18.36■□□□□ 0.53
SKA2-209ENST00000583976 PPM1EQ8WY54 764 aa18.36■□□□□ 0.53
SKA2-209ENST00000583976 COPS5Q92905 334 aa18.36■□□□□ 0.53
SKA2-209ENST00000583976 WDR11Q9BZH6 1224 aa18.36■□□□□ 0.53
SKA2-209ENST00000583976 ALDH8A1Q9H2A2 487 aaPredicted RBP18.36■□□□□ 0.53
SKA2-209ENST00000583976 ZEB2O60315 1214 aa18.35■□□□□ 0.53
SKA2-209ENST00000583976 MYL3P08590 195 aa18.35■□□□□ 0.53
SKA2-209ENST00000583976 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
SKA2-209ENST00000583976 RABGGTBP53611 331 aa18.35■□□□□ 0.53
SKA2-209ENST00000583976 RPS6P62753 249 aaKnown RBP18.35■□□□□ 0.53
SKA2-209ENST00000583976 PURAQ00577 322 aaKnown RBP18.35■□□□□ 0.53
SKA2-209ENST00000583976 USH1GQ495M9 461 aa18.35■□□□□ 0.53
SKA2-209ENST00000583976 AKNAD1Q5T1N1 836 aa18.35■□□□□ 0.53
SKA2-209ENST00000583976 RNF207Q6ZRF8 634 aa18.35■□□□□ 0.53
SKA2-209ENST00000583976 IL25Q9H293 177 aa18.35■□□□□ 0.53
SKA2-209ENST00000583976 TCP11L1Q9NUJ3 509 aa18.35■□□□□ 0.53
SKA2-209ENST00000583976 ADD3Q9UEY8 706 aaKnown RBP18.35■□□□□ 0.53
SKA2-209ENST00000583976 Q9Y3F1 56 aa18.35■□□□□ 0.53
SKA2-209ENST00000583976 TNKSO95271 1327 aa18.34■□□□□ 0.53
SKA2-209ENST00000583976 WDR19Q8NEZ3 1342 aa18.34■□□□□ 0.53
SKA2-209ENST00000583976 ARIH2O95376 493 aa18.34■□□□□ 0.53
SKA2-209ENST00000583976 MYOGP15173 224 aa18.34■□□□□ 0.53
SKA2-209ENST00000583976 MFAP1P55081 439 aaKnown RBP18.34■□□□□ 0.53
SKA2-209ENST00000583976 RBM47A0AV96 593 aaKnown RBP18.33■□□□□ 0.52
SKA2-209ENST00000583976 FGBP02675 491 aa18.33■□□□□ 0.52
SKA2-209ENST00000583976 EDNRBP24530 442 aa18.33■□□□□ 0.52
SKA2-209ENST00000583976 PPP2R5BQ15173 497 aa18.33■□□□□ 0.52
SKA2-209ENST00000583976 RAB30Q15771 203 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms