RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 RGMBQ6NW40 437 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 LBX2Q6XYB7 198 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 NEK8Q86SG6 692 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 CLEC4DQ8WXI8 215 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 BRI3BPQ8WY22 251 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TBC1D5Q92609 795 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TRERF1Q96PN7 1200 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TEX13BQ9BXU2 312 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TLL2Q9Y6L7 1015 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 GOLGA6L4A6NEF3 574 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 SPDYE3A6NKU9 549 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 NFIBO00712 420 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 FOSP01100 380 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 MCM7P33993 719 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 MUM1L1Q5H9M0 696 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 POTEEQ6S8J3 1075 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 MCF2L2Q86YR7 1114 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ANO3Q9BYT9 981 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 RNF146Q9NTX7 359 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 PNMA3Q9UL41 463 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ABT1Q9ULW3 272 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 RIPK3Q9Y572 518 aa15.77■□□□□ 0.12
CDK5RAP3-219ENST00000580670 FSD2A1L4K1 749 aa15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 TMEM88BA6NKF7 163 aa15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 BTBD19C9JJ37 291 aa15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PDHXO00330 501 aa15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 BMP15O95972 392 aa15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 MARCKSP29966 332 aaPredicted RBP15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 STAT3P40763 770 aa15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 LETM2Q2VYF4 491 aa15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 FCHSD1Q86WN1 690 aa15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 JMYQ8N9B5 988 aa15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 ZNF784Q8NCA9 323 aaPredicted RBP15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 BTBD7Q9P203 1132 aa15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 DDX49Q9Y6V7 483 aaKnown RBP15.77■□□□□ 0.11
CDK5RAP3-219ENST00000580670 A0A0G2JMZ2 1700 aa15.76■□□□□ 0.11
CDK5RAP3-219ENST00000580670 TRAK2O60296 914 aa15.76■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PPP6R2O75170 966 aa15.76■□□□□ 0.11
CDK5RAP3-219ENST00000580670 FSTL1Q12841 308 aa15.76■□□□□ 0.11
CDK5RAP3-219ENST00000580670 SKOR2Q2VWA4 1001 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP3-219ENST00000580670 TKFCQ3LXA3 575 aa15.76■□□□□ 0.11
CDK5RAP3-219ENST00000580670 ANKRD23Q86SG2 305 aa15.76■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PAGR1Q9BTK6 254 aa15.76■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PCDHA7Q9UN72 937 aa15.76■□□□□ 0.11
CDK5RAP3-219ENST00000580670 SLC45A1Q9Y2W3 748 aa15.76■□□□□ 0.11
CDK5RAP3-219ENST00000580670 CCNT1O60563 726 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PEX10O60683 326 aa15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 HSD17B4P51659 736 aa15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 GPT2Q8TD30 523 aa15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 MBD3O95983 291 aa15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 SLC10A3P09131 477 aa15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 CYP2C8P10632 490 aa15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PTGDRQ13258 359 aa15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 SAMD3Q8N6K7 520 aa15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 SPATC1LQ9H0A9 340 aa15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 MRVI1Q9Y6F6 885 aa15.75■□□□□ 0.11
CDK5RAP3-219ENST00000580670 MYH7BA7E2Y1 1941 aa15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 MANSC4A6NHS7 340 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 CNMDO75829 334 aa15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 GHRHRQ02643 423 aa15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 NSMFQ6X4W1 530 aa15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 RIOX2Q8IUF8 465 aa15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 KRI1Q8N9T8 703 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 SMCR8Q8TEV9 937 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PTPN18Q99952 460 aa15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 ACAD9Q9H845 621 aa15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 EHMT1Q9H9B1 1298 aa15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 MAP3K20Q9NYL2 800 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 RBPJLQ9UBG7 517 aa15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 RABGAP1Q9Y3P9 1069 aa15.74■□□□□ 0.11
CDK5RAP3-219ENST00000580670 RBBP6Q7Z6E9 1792 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 TESPA1A2RU30 521 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 EDIL3O43854 480 aa15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 SREBF1P36956 1147 aa15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 USP11P51784 963 aa15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 RPS6P62753 249 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 ARHGAP4P98171 946 aa15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 ATP2C1P98194 919 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 KLHL40Q2TBA0 621 aa15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 AXDND1Q5T1B0 1012 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 ADALQ6DHV7 355 aa15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 RNF207Q6ZRF8 634 aa15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 GTF3C2Q8WUA4 911 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 CCDC102AQ96A19 550 aa15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 TXNRD2Q9NNW7 524 aa15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-219ENST00000580670 NEMFO60524 1076 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 CUTAO60888 179 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 TDP2O95551 362 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PTPREP23469 700 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 ORC2Q13416 577 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 SLC30A10Q6XR72 485 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 C4orf32Q8N8J7 132 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 CHST13Q8NET6 341 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 SYTL5Q8TDW5 730 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 CRYGNQ8WXF5 182 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 HHIPL1Q96JK4 782 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 NAP1L4Q99733 375 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 COL20A1Q9P218 1284 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 FBXO2Q9UK22 296 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms