RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-208ENST00000578218 TMEM63BQ5T3F8 832 aa29.35■■■□□ 2.29
THRA-208ENST00000578218 MFSD6Q6ZSS7 791 aa29.35■■■□□ 2.29
THRA-208ENST00000578218 PBX4Q9BYU1 374 aa29.35■■■□□ 2.29
THRA-208ENST00000578218 PCP11498 1178 aaKnown RBP29.34■■■□□ 2.29
THRA-208ENST00000578218 CALML3P27482 149 aa29.34■■■□□ 2.29
THRA-208ENST00000578218 MFAP1P55081 439 aaKnown RBP29.34■■■□□ 2.29
THRA-208ENST00000578218 DUSP28Q4G0W2 176 aa29.34■■■□□ 2.29
THRA-208ENST00000578218 AKNAD1Q5T1N1 836 aa29.34■■■□□ 2.29
THRA-208ENST00000578218 RASIP1Q5U651 963 aa29.34■■■□□ 2.29
THRA-208ENST00000578218 PNMA2Q9UL42 364 aa29.34■■■□□ 2.29
THRA-208ENST00000578218 UMODL1Q5DID0 1318 aa29.34■■■□□ 2.29
THRA-208ENST00000578218 VCANP13611 3396 aa29.33■■■□□ 2.29
THRA-208ENST00000578218 LOC102724159A0A0B4J2E5 919 aa29.33■■■□□ 2.29
THRA-208ENST00000578218 GRXCR1A8MXD5 290 aa29.33■■■□□ 2.29
THRA-208ENST00000578218 B4GALT4O60513 344 aa29.33■■■□□ 2.29
THRA-208ENST00000578218 PBX2P40425 430 aa29.33■■■□□ 2.29
THRA-208ENST00000578218 ZNF543Q08ER8 600 aa29.33■■■□□ 2.29
THRA-208ENST00000578218 PWP2Q15269 919 aaKnown RBP29.33■■■□□ 2.29
THRA-208ENST00000578218 TBC1D10CQ8IV04 446 aa29.33■■■□□ 2.29
THRA-208ENST00000578218 MPHOSPH6Q99547 160 aaKnown RBP29.33■■■□□ 2.29
THRA-208ENST00000578218 TRPV6Q9H1D0 765 aa29.33■■■□□ 2.29
THRA-208ENST00000578218 RNF41Q9H4P4 317 aaPredicted RBP29.33■■■□□ 2.29
THRA-208ENST00000578218 GRIN2DO15399 1336 aa29.33■■■□□ 2.29
THRA-208ENST00000578218 CCL23P55773 120 aa29.32■■■□□ 2.28
THRA-208ENST00000578218 RNF207Q6ZRF8 634 aa29.32■■■□□ 2.28
THRA-208ENST00000578218 GAS2L1Q99501 681 aaPredicted RBP29.32■■■□□ 2.28
THRA-208ENST00000578218 WDR11Q9BZH6 1224 aa29.32■■■□□ 2.28
THRA-208ENST00000578218 POLR3EQ9NVU0 708 aa29.32■■■□□ 2.28
THRA-208ENST00000578218 NEDD4P46934 1319 aa29.31■■■□□ 2.28
THRA-208ENST00000578218 CPT1AP50416 773 aa29.31■■■□□ 2.28
THRA-208ENST00000578218 PDE4DQ08499 809 aa29.31■■■□□ 2.28
THRA-208ENST00000578218 OR6J1Q8NGC5 347 aa29.31■■■□□ 2.28
THRA-208ENST00000578218 HERVK_113Q902F9 699 aa29.31■■■□□ 2.28
THRA-208ENST00000578218 NOC4LQ9BVI4 516 aaKnown RBP29.31■■■□□ 2.28
THRA-208ENST00000578218 WDR19Q8NEZ3 1342 aa29.3■■■□□ 2.28
THRA-208ENST00000578218 RAD50Q92878 1312 aa29.3■■■□□ 2.28
THRA-208ENST00000578218 RAB30Q15771 203 aa29.3■■■□□ 2.28
THRA-208ENST00000578218 CLEC4DQ8WXI8 215 aa29.3■■■□□ 2.28
THRA-208ENST00000578218 ESR2Q92731 530 aa29.3■■■□□ 2.28
THRA-208ENST00000578218 TTC14Q96N46 770 aa29.3■■■□□ 2.28
THRA-208ENST00000578218 MSRAQ9UJ68 235 aa29.3■■■□□ 2.28
THRA-208ENST00000578218 FGBP02675 491 aa29.29■■■□□ 2.28
THRA-208ENST00000578218 MYL3P08590 195 aa29.29■■■□□ 2.28
THRA-208ENST00000578218 PPP2R5BQ15173 497 aa29.29■■■□□ 2.28
THRA-208ENST00000578218 B4GALNT3Q6L9W6 998 aa29.29■■■□□ 2.28
THRA-208ENST00000578218 ZKSCAN3Q9BRR0 538 aa29.29■■■□□ 2.28
THRA-208ENST00000578218 WNT8AQ9H1J5 351 aa29.29■■■□□ 2.28
THRA-208ENST00000578218 ALDH8A1Q9H2A2 487 aaPredicted RBP29.29■■■□□ 2.28
THRA-208ENST00000578218 GPHNQ9NQX3 736 aaPredicted RBP29.29■■■□□ 2.28
THRA-208ENST00000578218 CXXC1Q9P0U4 656 aaPredicted RBP29.29■■■□□ 2.28
THRA-208ENST00000578218 TANC1Q9C0D5 1861 aa29.29■■■□□ 2.28
THRA-208ENST00000578218 SNHG28P0DPA3 235 aa29.28■■■□□ 2.28
THRA-208ENST00000578218 RPS6P62753 249 aaKnown RBP29.28■■■□□ 2.28
THRA-208ENST00000578218 USH1GQ495M9 461 aa29.28■■■□□ 2.28
THRA-208ENST00000578218 GPATCH4Q5T3I0 446 aaKnown RBP29.28■■■□□ 2.28
THRA-208ENST00000578218 OTOP2Q7RTS6 562 aa29.28■■■□□ 2.28
THRA-208ENST00000578218 PURAQ00577 322 aaKnown RBP29.27■■■□□ 2.28
THRA-208ENST00000578218 BRDTQ58F21 947 aaPredicted RBP29.27■■■□□ 2.28
THRA-208ENST00000578218 USP38Q8NB14 1042 aa29.27■■■□□ 2.28
THRA-208ENST00000578218 MYH6P13533 1939 aa29.27■■■□□ 2.28
THRA-208ENST00000578218 RBM47A0AV96 593 aaKnown RBP29.26■■■□□ 2.27
THRA-208ENST00000578218 ZNF213O14771 459 aa29.26■■■□□ 2.27
THRA-208ENST00000578218 GOLGA8HP0CJ92 632 aa29.26■■■□□ 2.27
THRA-208ENST00000578218 SDSP20132 328 aa29.26■■■□□ 2.27
THRA-208ENST00000578218 FAM47CQ5HY64 1035 aa29.26■■■□□ 2.27
THRA-208ENST00000578218 DNERQ8NFT8 737 aa29.26■■■□□ 2.27
THRA-208ENST00000578218 MTG1Q9BT17 334 aaPredicted RBP29.26■■■□□ 2.27
THRA-208ENST00000578218 PRDM12Q9H4Q4 367 aa29.26■■■□□ 2.27
THRA-208ENST00000578218 SCN10AQ9Y5Y9 1956 aa29.26■■■□□ 2.27
THRA-208ENST00000578218 TNKSO95271 1327 aa29.25■■■□□ 2.27
THRA-208ENST00000578218 B4DLN1 442 aa29.25■■■□□ 2.27
THRA-208ENST00000578218 NKRFO15226 690 aaKnown RBP eCLIP29.25■■■□□ 2.27
THRA-208ENST00000578218 SUPT20HL2P0C7V6 817 aa29.25■■■□□ 2.27
THRA-208ENST00000578218 MRPL12P52815 198 aaKnown RBP29.25■■■□□ 2.27
THRA-208ENST00000578218 AAMPQ13685 434 aa29.25■■■□□ 2.27
THRA-208ENST00000578218 IQCA1Q86XH1 822 aa29.25■■■□□ 2.27
THRA-208ENST00000578218 RPUSD2Q8IZ73 545 aaKnown RBP29.25■■■□□ 2.27
THRA-208ENST00000578218 SCFD2Q8WU76 684 aa29.25■■■□□ 2.27
THRA-208ENST00000578218 SCLYQ96I15 445 aa29.25■■■□□ 2.27
THRA-208ENST00000578218 NKX2-4Q9H2Z4 354 aa29.25■■■□□ 2.27
THRA-208ENST00000578218 RWDD1Q9H446 243 aaPredicted RBP29.25■■■□□ 2.27
THRA-208ENST00000578218 DIAPH3Q9NSV4 1193 aa29.25■■■□□ 2.27
THRA-208ENST00000578218 TRMT13Q9NUP7 481 aaKnown RBP29.25■■■□□ 2.27
THRA-208ENST00000578218 ZBBXA8MT70 800 aa29.24■■■□□ 2.27
THRA-208ENST00000578218 SMC5Q8IY18 1101 aa29.24■■■□□ 2.27
THRA-208ENST00000578218 SYMPKQ92797 1274 aaKnown RBP29.24■■■□□ 2.27
THRA-208ENST00000578218 SPTBN5Q9NRC6 3674 aaKnown RBP29.24■■■□□ 2.27
THRA-208ENST00000578218 SCN5AQ14524 2016 aa29.23■■■□□ 2.27
THRA-208ENST00000578218 EDNRBP24530 442 aa29.23■■■□□ 2.27
THRA-208ENST00000578218 CDC37Q16543 378 aaPredicted RBP29.23■■■□□ 2.27
THRA-208ENST00000578218 CWC27Q6UX04 472 aaKnown RBP29.23■■■□□ 2.27
THRA-208ENST00000578218 CHD1LQ86WJ1 897 aa29.23■■■□□ 2.27
THRA-208ENST00000578218 PNMA1Q8ND90 353 aa29.23■■■□□ 2.27
THRA-208ENST00000578218 PPM1EQ8WY54 764 aa29.23■■■□□ 2.27
THRA-208ENST00000578218 CPVLQ9H3G5 476 aa29.23■■■□□ 2.27
THRA-208ENST00000578218 KAT14Q9H8E8 782 aa29.23■■■□□ 2.27
THRA-208ENST00000578218 SLC28A3Q9HAS3 691 aa29.23■■■□□ 2.27
THRA-208ENST00000578218 CYP2C9P11712 490 aa29.22■■■□□ 2.27
THRA-208ENST00000578218 NT5C2P49902 561 aa29.22■■■□□ 2.27
THRA-208ENST00000578218 CCDC178Q5BJE1 867 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms