RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 KLRC3Q07444 240 aa11.6□□□□□ -0.55
CRLF3-202ENST00000577725 ASPRV1Q53RT3 343 aa11.6□□□□□ -0.55
CRLF3-202ENST00000577725 GPAT2Q6NUI2 795 aa11.6□□□□□ -0.55
CRLF3-202ENST00000577725 HOMER1Q86YM7 354 aa11.6□□□□□ -0.55
CRLF3-202ENST00000577725 DCAF4Q8WV16 495 aa11.6□□□□□ -0.55
CRLF3-202ENST00000577725 ZNF112Q9UJU3 913 aa11.6□□□□□ -0.55
CRLF3-202ENST00000577725 PHIPQ8WWQ0 1821 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 CTNND1O60716 968 aaKnown RBP11.59□□□□□ -0.55
CRLF3-202ENST00000577725 BMP1P13497 986 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 SCG2P13521 617 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 MCM4P33991 863 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 SLC1A4P43007 532 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 SNAP25P60880 206 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 TRIM29Q14134 588 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 SCYL3Q8IZE3 742 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 GMCL1P1Q8NEA9 526 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 FBXO18Q8NFZ0 1043 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 SMCR8Q8TEV9 937 aaPredicted RBP11.59□□□□□ -0.55
CRLF3-202ENST00000577725 WASF1Q92558 559 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 GBP4Q96PP9 640 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 PIGSQ96S52 555 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 FEZ1Q99689 392 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 LZTS2Q9BRK4 669 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 SPZ1Q9BXG8 430 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 ZNF576Q9H609 170 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 GDPD2Q9HCC8 539 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 TMX2Q9Y320 296 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 MGAMO43451 1857 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 XIRP2A4UGR9 3374 aa11.59□□□□□ -0.55
CRLF3-202ENST00000577725 USP17L10C9JJH3 530 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 ADAMTS3O15072 1205 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 TAL1P17542 331 aaPredicted RBP11.58□□□□□ -0.56
CRLF3-202ENST00000577725 NCLP19338 710 aaKnown RBP11.58□□□□□ -0.56
CRLF3-202ENST00000577725 DNAJB2P25686 324 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 FOXK2Q01167 660 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 DNM1Q05193 864 aaKnown RBP11.58□□□□□ -0.56
CRLF3-202ENST00000577725 PFKFB3Q16875 520 aaPredicted RBP11.58□□□□□ -0.56
CRLF3-202ENST00000577725 FAM83BQ5T0W9 1011 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 MAP3K21Q5TCX8 1036 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 WWC2Q6AWC2 1192 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 HEATR3Q7Z4Q2 680 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 ADGRF4Q8IZF3 695 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 OXER1Q8TDS5 423 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 PICK1Q9NRD5 415 aa11.58□□□□□ -0.56
CRLF3-202ENST00000577725 TMEM232C9JQI7 657 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 CXCL11O14625 94 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 BMP3P12645 472 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
CRLF3-202ENST00000577725 PTPRAP18433 802 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 IKQ13123 557 aaPredicted RBP11.57□□□□□ -0.56
CRLF3-202ENST00000577725 GPATCH4Q5T3I0 446 aaKnown RBP11.57□□□□□ -0.56
CRLF3-202ENST00000577725 TYW1BQ6NUM6 668 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 FASTKD5Q7L8L6 764 aaKnown RBP11.57□□□□□ -0.56
CRLF3-202ENST00000577725 RRP36Q96EU6 259 aaKnown RBP11.57□□□□□ -0.56
CRLF3-202ENST00000577725 GMCL1Q96IK5 515 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 SENP6Q9GZR1 1112 aaPredicted RBP11.57□□□□□ -0.56
CRLF3-202ENST00000577725 TSPYL2Q9H2G4 693 aaPredicted RBP11.57□□□□□ -0.56
CRLF3-202ENST00000577725 RIOX1Q9H6W3 641 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 VCPKMTQ9H867 229 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 JMJD4Q9H9V9 463 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 GOPCQ9HD26 462 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 C11orf16Q9NQ32 467 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 CXXC1Q9P0U4 656 aaPredicted RBP11.57□□□□□ -0.56
CRLF3-202ENST00000577725 TFIP11Q9UBB9 837 aaKnown RBP11.57□□□□□ -0.56
CRLF3-202ENST00000577725 SLC45A1Q9Y2W3 748 aa11.57□□□□□ -0.56
CRLF3-202ENST00000577725 MUC6Q6W4X9 2439 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 FAM205CA6NFA0 338 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 STXBP3O00186 592 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 FIBPO43427 364 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 MMP1P03956 469 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 NHLH1Q02575 133 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 SPP2Q13103 211 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 MTMR2Q13614 643 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 GNL2Q13823 731 aaKnown RBP11.56□□□□□ -0.56
CRLF3-202ENST00000577725 CCDC85BQ15834 202 aaPredicted RBP11.56□□□□□ -0.56
CRLF3-202ENST00000577725 AAK1Q2M2I8 961 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 NOL9Q5SY16 702 aaKnown RBP11.56□□□□□ -0.56
CRLF3-202ENST00000577725 SYDE2Q5VT97 1194 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 CLEC17AQ6ZS10 378 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 DIS3L2Q8IYB7 885 aaKnown RBP11.56□□□□□ -0.56
CRLF3-202ENST00000577725 ANKRD13CQ8N6S4 541 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 TRIB2Q92519 343 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 BADQ92934 168 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 RNPC3Q96LT9 517 aaKnown RBP11.56□□□□□ -0.56
CRLF3-202ENST00000577725 FTOQ9C0B1 505 aaKnown RBP eCLIP11.56□□□□□ -0.56
CRLF3-202ENST00000577725 SH2D4AQ9H788 454 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 ZHX2Q9Y6X8 837 aa11.56□□□□□ -0.56
CRLF3-202ENST00000577725 FAM86C2PA6NEL3 165 aa11.55□□□□□ -0.56
CRLF3-202ENST00000577725 TRIM75PA6NK02 468 aa11.55□□□□□ -0.56
CRLF3-202ENST00000577725 BTBD18B2RXH4 712 aa11.55□□□□□ -0.56
CRLF3-202ENST00000577725 PPP1R11O60927 126 aaPredicted RBP11.55□□□□□ -0.56
CRLF3-202ENST00000577725 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
CRLF3-202ENST00000577725 NLRP5P59047 1200 aa11.55□□□□□ -0.56
CRLF3-202ENST00000577725 CEBPZQ03701 1054 aaKnown RBP11.55□□□□□ -0.56
CRLF3-202ENST00000577725 NR5A1Q13285 461 aa11.55□□□□□ -0.56
CRLF3-202ENST00000577725 NPY5RQ15761 445 aa11.55□□□□□ -0.56
CRLF3-202ENST00000577725 LHX8Q68G74 356 aa11.55□□□□□ -0.56
CRLF3-202ENST00000577725 TIFAQ96CG3 184 aa11.55□□□□□ -0.56
CRLF3-202ENST00000577725 PHF20Q9BVI0 1012 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms