RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 CPXCR1Q8N123 301 aa19.31■□□□□ 0.68
TMEM88-202ENST00000574668 TRIM43Q96BQ3 446 aaPredicted RBP19.31■□□□□ 0.68
TMEM88-202ENST00000574668 MMP19Q99542 508 aa19.31■□□□□ 0.68
TMEM88-202ENST00000574668 CPVLQ9H3G5 476 aa19.31■□□□□ 0.68
TMEM88-202ENST00000574668 PARP14Q460N5 1801 aa19.3■□□□□ 0.68
TMEM88-202ENST00000574668 STAT3P40763 770 aa19.3■□□□□ 0.68
TMEM88-202ENST00000574668 SLC4A3P48751 1232 aa19.3■□□□□ 0.68
TMEM88-202ENST00000574668 AK2P54819 239 aa19.3■□□□□ 0.68
TMEM88-202ENST00000574668 SNAP25P60880 206 aa19.3■□□□□ 0.68
TMEM88-202ENST00000574668 CCDC174Q6PII3 467 aa19.3■□□□□ 0.68
TMEM88-202ENST00000574668 NOL8Q76FK4 1167 aaKnown RBP19.3■□□□□ 0.68
TMEM88-202ENST00000574668 LENG1Q96BZ8 264 aaPredicted RBP19.3■□□□□ 0.68
TMEM88-202ENST00000574668 KIF2CQ99661 725 aa19.3■□□□□ 0.68
TMEM88-202ENST00000574668 LARP6Q9BRS8 491 aaKnown RBP19.3■□□□□ 0.68
TMEM88-202ENST00000574668 SLC38A10Q9HBR0 1119 aa19.3■□□□□ 0.68
TMEM88-202ENST00000574668 RAVER2Q9HCJ3 691 aaKnown RBP19.3■□□□□ 0.68
TMEM88-202ENST00000574668 CCDC196A0A1B0GTZ2 297 aa19.29■□□□□ 0.68
TMEM88-202ENST00000574668 SLC25A27O95847 323 aa19.29■□□□□ 0.68
TMEM88-202ENST00000574668 PGK1P00558 417 aa19.29■□□□□ 0.68
TMEM88-202ENST00000574668 ITGB8P26012 769 aa19.29■□□□□ 0.68
TMEM88-202ENST00000574668 ZNF697Q5TEC3 545 aa19.29■□□□□ 0.68
TMEM88-202ENST00000574668 RIOX2Q8IUF8 465 aa19.29■□□□□ 0.68
TMEM88-202ENST00000574668 ADGRF4Q8IZF3 695 aa19.29■□□□□ 0.68
TMEM88-202ENST00000574668 ZNF274Q96GC6 653 aaPredicted RBP19.29■□□□□ 0.68
TMEM88-202ENST00000574668 XPNPEP3Q9NQH7 507 aa19.29■□□□□ 0.68
TMEM88-202ENST00000574668 COL11A1P12107 1806 aaPredicted RBP19.28■□□□□ 0.68
TMEM88-202ENST00000574668 PDIA3P30101 505 aaKnown RBP19.28■□□□□ 0.68
TMEM88-202ENST00000574668 COPB2P35606 906 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 OAZ1P54368 228 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 EVCP57679 992 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 TLE2Q04725 743 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 KCTD2Q14681 263 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 PPP2R5BQ15173 497 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 ZNF792Q3KQV3 632 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.28■□□□□ 0.68
TMEM88-202ENST00000574668 REPS2Q8NFH8 660 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 TINF2Q9BSI4 451 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 COL25A1Q9BXS0 654 aaPredicted RBP19.28■□□□□ 0.68
TMEM88-202ENST00000574668 TEX13BQ9BXU2 312 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 RANBP17Q9H2T7 1088 aaKnown RBP19.28■□□□□ 0.68
TMEM88-202ENST00000574668 ZNF214Q9UL59 606 aaPredicted RBP19.28■□□□□ 0.68
TMEM88-202ENST00000574668 PHF24Q9UPV7 400 aa19.28■□□□□ 0.68
TMEM88-202ENST00000574668 ST18O60284 1047 aa19.27■□□□□ 0.68
TMEM88-202ENST00000574668 PLEKHA8P1O95397 391 aa19.27■□□□□ 0.68
TMEM88-202ENST00000574668 RARBP10826 455 aa19.27■□□□□ 0.68
TMEM88-202ENST00000574668 CCT2P78371 535 aaKnown RBP19.27■□□□□ 0.68
TMEM88-202ENST00000574668 STK3Q13188 491 aa19.27■□□□□ 0.68
TMEM88-202ENST00000574668 CDC37Q16543 378 aaPredicted RBP19.27■□□□□ 0.68
TMEM88-202ENST00000574668 C1orf53Q5VUE5 145 aa19.27■□□□□ 0.68
TMEM88-202ENST00000574668 SNRNP48Q6IEG0 339 aaKnown RBP19.27■□□□□ 0.68
TMEM88-202ENST00000574668 TMTC3Q6ZXV5 915 aa19.27■□□□□ 0.68
TMEM88-202ENST00000574668 IL27Q8NEV9 243 aa19.27■□□□□ 0.68
TMEM88-202ENST00000574668 SLKQ9H2G2 1235 aaPredicted RBP19.27■□□□□ 0.68
TMEM88-202ENST00000574668 JMJD4Q9H9V9 463 aa19.27■□□□□ 0.68
TMEM88-202ENST00000574668 PNMA2Q9UL42 364 aa19.27■□□□□ 0.68
TMEM88-202ENST00000574668 ATP2A1O14983 1001 aa19.26■□□□□ 0.67
TMEM88-202ENST00000574668 ZNF865P0CJ78 1059 aaPredicted RBP19.26■□□□□ 0.67
TMEM88-202ENST00000574668 SMARCA1P28370 1054 aa19.26■□□□□ 0.67
TMEM88-202ENST00000574668 HOMER1Q86YM7 354 aa19.26■□□□□ 0.67
TMEM88-202ENST00000574668 CCDC82Q8N4S0 544 aa19.26■□□□□ 0.67
TMEM88-202ENST00000574668 PIBF1Q8WXW3 757 aa19.26■□□□□ 0.67
TMEM88-202ENST00000574668 RRP36Q96EU6 259 aaKnown RBP19.26■□□□□ 0.67
TMEM88-202ENST00000574668 CDX2Q99626 313 aaPredicted RBP19.26■□□□□ 0.67
TMEM88-202ENST00000574668 SPZ1Q9BXG8 430 aa19.26■□□□□ 0.67
TMEM88-202ENST00000574668 RIOX1Q9H6W3 641 aa19.26■□□□□ 0.67
TMEM88-202ENST00000574668 CCPG1Q9ULG6 757 aa19.26■□□□□ 0.67
TMEM88-202ENST00000574668 EYSQ5T1H1 3165 aa19.26■□□□□ 0.67
TMEM88-202ENST00000574668 ICAM1P05362 532 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 ALAS1P13196 640 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 CDC27P30260 824 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 EPHB4P54760 987 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 QRICH1Q2TAL8 776 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 TKFCQ3LXA3 575 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 CMTR1Q8N1G2 835 aaKnown RBP19.25■□□□□ 0.67
TMEM88-202ENST00000574668 SRBD1Q8N5C6 995 aaKnown RBP19.25■□□□□ 0.67
TMEM88-202ENST00000574668 AGBL1Q96MI9 1066 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 PIGSQ96S52 555 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 SEMA6BQ9H3T3 888 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 SEC63Q9UGP8 760 aaKnown RBP19.25■□□□□ 0.67
TMEM88-202ENST00000574668 NRBP1Q9UHY1 535 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 TPCN1Q9ULQ1 816 aa19.25■□□□□ 0.67
TMEM88-202ENST00000574668 ZNFX1Q9P2E3 1918 aaKnown RBP19.24■□□□□ 0.67
TMEM88-202ENST00000574668 A0A1W2PQ45 241 aaPredicted RBP19.24■□□□□ 0.67
TMEM88-202ENST00000574668 A0A1W2PQY0 241 aa19.24■□□□□ 0.67
TMEM88-202ENST00000574668 CPLX1O14810 134 aa19.24■□□□□ 0.67
TMEM88-202ENST00000574668 ZBTB5O15062 677 aa19.24■□□□□ 0.67
TMEM88-202ENST00000574668 PQBP1O60828 265 aaKnown RBP19.24■□□□□ 0.67
TMEM88-202ENST00000574668 CLTBP09497 229 aa19.24■□□□□ 0.67
TMEM88-202ENST00000574668 ADD1P35611 737 aaKnown RBP19.24■□□□□ 0.67
TMEM88-202ENST00000574668 CPLX2Q6PUV4 134 aaKnown RBP19.24■□□□□ 0.67
TMEM88-202ENST00000574668 RNF180Q86T96 592 aa19.24■□□□□ 0.67
TMEM88-202ENST00000574668 FBXO11Q86XK2 927 aa19.24■□□□□ 0.67
TMEM88-202ENST00000574668 TTYH1Q9H313 450 aaPredicted RBP19.24■□□□□ 0.67
TMEM88-202ENST00000574668 FAM217BQ9NTX9 383 aaPredicted RBP19.24■□□□□ 0.67
TMEM88-202ENST00000574668 LIMCH1Q9UPQ0 1083 aa19.24■□□□□ 0.67
TMEM88-202ENST00000574668 DIS3Q9Y2L1 958 aaKnown RBP19.24■□□□□ 0.67
TMEM88-202ENST00000574668 RIPK3Q9Y572 518 aa19.24■□□□□ 0.67
TMEM88-202ENST00000574668 ZNF536O15090 1300 aa19.24■□□□□ 0.67
TMEM88-202ENST00000574668 NID2Q14112 1375 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 PNMA6FA0A0J9YX94 578 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms