RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 DHX40Q8IX18 779 aaKnown RBP32.92■■■□□ 2.86
CTDNEP1-208ENST00000573600 DISC1Q9NRI5 854 aa32.92■■■□□ 2.86
CTDNEP1-208ENST00000573600 DDX25Q9UHL0 483 aaKnown RBP32.92■■■□□ 2.86
CTDNEP1-208ENST00000573600 POLR2AP24928 1970 aaKnown RBP32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 SPDYE3A6NKU9 549 aa32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 SLC37A4O43826 429 aa32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 FXR2P51116 673 aaKnown RBP eCLIP32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 PRAMEF18Q5VWM3 479 aa32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 CCDC174Q6PII3 467 aa32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 PRPF38AQ8NAV1 312 aaKnown RBP32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 RAB34Q9BZG1 259 aa32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 MRPL11Q9Y3B7 192 aaKnown RBP32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 PDXDC2PQ6P474 469 aa32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 GRAMD1CQ8IYS0 662 aa32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 IGSF22Q8N9C0 903 aa32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 SLF1Q9BQI6 1058 aa32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 MAN1B1Q9UKM7 699 aa32.91■■■□□ 2.86
CTDNEP1-208ENST00000573600 ABCB11O95342 1321 aa32.9■■■□□ 2.86
CTDNEP1-208ENST00000573600 STAT6P42226 847 aa32.9■■■□□ 2.86
CTDNEP1-208ENST00000573600 DPY19L2Q6NUT2 758 aa32.9■■■□□ 2.86
CTDNEP1-208ENST00000573600 KLRG1Q96E93 195 aa32.9■■■□□ 2.86
CTDNEP1-208ENST00000573600 FBXO28Q9NVF7 368 aa32.9■■■□□ 2.86
CTDNEP1-208ENST00000573600 CYP3A7-CYP3A51PA0A087WV96 503 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 SMTNL1A8MU46 457 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 OPLAHO14841 1288 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 PTPRAP18433 802 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 CYP3A7P24462 503 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 CDC25AP30304 524 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 TECP42680 631 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 TXKP42681 527 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 AFMP43652 599 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 KARSQ15046 597 aaKnown RBP32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 HS1BP3Q53T59 392 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 RRAGBQ5VZM2 374 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 RASSF8Q8NHQ8 419 aa32.89■■■□□ 2.86
CTDNEP1-208ENST00000573600 MTMR2Q13614 643 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 PDIA5Q14554 519 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 NOL9Q5SY16 702 aaKnown RBP32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 ISM2Q6H9L7 571 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 CABP7Q86V35 215 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 AOPEPQ8N6M6 819 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 ZNF280CQ8ND82 737 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 ZKSCAN4Q969J2 545 aaPredicted RBP32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 DCPSQ96C86 337 aaKnown RBP32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 CUEDC2Q9H467 287 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 DACH1Q9UI36 760 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 AP5Z1O43299 807 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 BACE1P56817 501 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 DPYDQ12882 1025 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 MORC3Q14149 939 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 CRYGNQ8WXF5 182 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 MBOAT7Q96N66 472 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 GSDMAQ96QA5 445 aa32.88■■■□□ 2.85
CTDNEP1-208ENST00000573600 SSC5DA1L4H1 1573 aa32.87■■■□□ 2.85
CTDNEP1-208ENST00000573600 PP2D1A8MPX8 630 aa32.87■■■□□ 2.85
CTDNEP1-208ENST00000573600 SREBF1P36956 1147 aa32.87■■■□□ 2.85
CTDNEP1-208ENST00000573600 SPP2Q13103 211 aa32.87■■■□□ 2.85
CTDNEP1-208ENST00000573600 EMILIN3Q9NT22 766 aa32.87■■■□□ 2.85
CTDNEP1-208ENST00000573600 GTPBP6O43824 516 aaPredicted RBP32.86■■■□□ 2.85
CTDNEP1-208ENST00000573600 ARHGAP4P98171 946 aa32.86■■■□□ 2.85
CTDNEP1-208ENST00000573600 MLKLQ8NB16 471 aa32.86■■■□□ 2.85
CTDNEP1-208ENST00000573600 MAGEF1Q9HAY2 307 aa32.86■■■□□ 2.85
CTDNEP1-208ENST00000573600 IKBKBO14920 756 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 ICAM1P05362 532 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 VCAM1P19320 739 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 TPM4P67936 248 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 LDHDQ86WU2 507 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 LRWD1Q9UFC0 647 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 PHIPQ8WWQ0 1821 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 C19orf81C9J6K1 198 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 GCOM1H8Y6P7 765 aaPredicted RBP32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 POLR2MP0CAP2 368 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 SARM1Q6SZW1 724 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 SULF1Q8IWU6 871 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 L3MBTL3Q96JM7 780 aaPredicted RBP32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 TANGO6Q9C0B7 1094 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 PNMA2Q9UL42 364 aa32.85■■■□□ 2.85
CTDNEP1-208ENST00000573600 SMCHD1A6NHR9 2005 aa32.84■■■□□ 2.85
CTDNEP1-208ENST00000573600 MARCH6O60337 910 aa32.84■■■□□ 2.85
CTDNEP1-208ENST00000573600 MYL1P05976 194 aa32.84■■■□□ 2.85
CTDNEP1-208ENST00000573600 FDX1P10109 184 aa32.84■■■□□ 2.85
CTDNEP1-208ENST00000573600 SAMD1Q6SPF0 538 aaPredicted RBP32.84■■■□□ 2.85
CTDNEP1-208ENST00000573600 CALML4Q96GE6 196 aa32.84■■■□□ 2.85
CTDNEP1-208ENST00000573600 P2RX7Q99572 595 aaKnown RBP32.84■■■□□ 2.85
CTDNEP1-208ENST00000573600 TAL1P17542 331 aaPredicted RBP32.83■■■□□ 2.85
CTDNEP1-208ENST00000573600 CT47A1Q5JQC4 288 aaPredicted RBP32.83■■■□□ 2.85
CTDNEP1-208ENST00000573600 C12orf42Q96LP6 360 aa32.83■■■□□ 2.85
CTDNEP1-208ENST00000573600 CYP3A4P08684 503 aa32.82■■■□□ 2.85
CTDNEP1-208ENST00000573600 NAALADL2Q58DX5 795 aa32.82■■■□□ 2.85
CTDNEP1-208ENST00000573600 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.82■■■□□ 2.853e-14■■□□□ 12.2
CTDNEP1-208ENST00000573600 HAS1Q92839 578 aa32.82■■■□□ 2.85
CTDNEP1-208ENST00000573600 RPAP3Q9H6T3 665 aaPredicted RBP32.82■■■□□ 2.85
CTDNEP1-208ENST00000573600 TTC12Q9H892 705 aaPredicted RBP32.82■■■□□ 2.85
CTDNEP1-208ENST00000573600 EHMT1Q9H9B1 1298 aa32.82■■■□□ 2.85
CTDNEP1-208ENST00000573600 PPP1R9AQ9ULJ8 1098 aa32.82■■■□□ 2.85
CTDNEP1-208ENST00000573600 ZHX2Q9Y6X8 837 aa32.82■■■□□ 2.85
CTDNEP1-208ENST00000573600 ZC3H4Q9UPT8 1303 aaKnown RBP32.82■■■□□ 2.85
CTDNEP1-208ENST00000573600 CFBP00751 764 aa32.82■■■□□ 2.84
CTDNEP1-208ENST00000573600 BMP6P22004 513 aa32.82■■■□□ 2.84
CTDNEP1-208ENST00000573600 HOXA13P31271 388 aaPredicted RBP32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms