RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 CUTAO60888 179 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 STAT3P40763 770 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 PTGDRQ13258 359 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 TMEM132BQ14DG7 1078 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 LETM2Q2VYF4 491 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 TPRNQ4KMQ1 711 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 TBC1D5Q92609 795 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 MS4A4AQ96JQ5 239 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 TRERF1Q96PN7 1200 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 NAP1L4Q99733 375 aaKnown RBP15.58■□□□□ 0.08
CCDC40-209ENST00000573474 TEX13BQ9BXU2 312 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 ANO3Q9BYT9 981 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 MAF1Q9H063 256 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 ZNF214Q9UL59 606 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-209ENST00000573474 SLC45A1Q9Y2W3 748 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 SRPRBQ9Y5M8 271 aaKnown RBP15.58■□□□□ 0.08
CCDC40-209ENST00000573474 RLFQ13129 1914 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 PARP14Q460N5 1801 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 TRPM7Q96QT4 1865 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 CCL15-CCL14A0A0B4J2E2 113 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 CCNT1O60563 726 aaKnown RBP15.57■□□□□ 0.08
CCDC40-209ENST00000573474 PTPREP23469 700 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 HOXA13P31271 388 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-209ENST00000573474 HSD17B4P51659 736 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 USP11P51784 963 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 HERVK_113P62684 666 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 ATP2C1P98194 919 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-209ENST00000573474 GHRHRQ02643 423 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 CCL15Q16663 113 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 AXDND1Q5T1B0 1012 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-209ENST00000573474 SNRNP48Q6IEG0 339 aaKnown RBP15.57■□□□□ 0.08
CCDC40-209ENST00000573474 CCAR1Q8IX12 1150 aaKnown RBP15.57■□□□□ 0.08
CCDC40-209ENST00000573474 C4orf32Q8N8J7 132 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 FERMT2Q96AC1 680 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 ANP32EQ9BTT0 268 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 EHMT1Q9H9B1 1298 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 FBXO2Q9UK22 296 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-209ENST00000573474 PNMA3Q9UL41 463 aa15.57■□□□□ 0.08
CCDC40-209ENST00000573474 LAD1O00515 517 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 NFIBO00712 420 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 GCFC2P16383 781 aaKnown RBP15.56■□□□□ 0.08
CCDC40-209ENST00000573474 CMA1P23946 247 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 SREBF1P36956 1147 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 ZNF157P51786 506 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-209ENST00000573474 MKRN3Q13064 507 aaKnown RBP15.56■□□□□ 0.08
CCDC40-209ENST00000573474 PLS1Q14651 629 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 MUM1L1Q5H9M0 696 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 ARL6IP4Q66PJ3 421 aaKnown RBP15.56■□□□□ 0.08
CCDC40-209ENST00000573474 PPP4R3AQ6IN85 833 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 ANKRD23Q86SG2 305 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 SAPCD2Q86UD0 394 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 FCHSD1Q86WN1 690 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 GTF3C2Q8WUA4 911 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-209ENST00000573474 HOMER2Q9NSB8 354 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 RNF146Q9NTX7 359 aa15.56■□□□□ 0.08
CCDC40-209ENST00000573474 EDIL3O43854 480 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 TOMM70O94826 608 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 ARHGAP4P98171 946 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 RGMBQ6NW40 437 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 POTEEQ6S8J3 1075 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 MOXD1Q6UVY6 613 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 RASAL3Q86YV0 1011 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 FSIP1Q8NA03 581 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 ZNF579Q8NAF0 562 aaKnown RBP15.55■□□□□ 0.08
CCDC40-209ENST00000573474 CHST13Q8NET6 341 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 CRYGNQ8WXF5 182 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 BRI3BPQ8WY22 251 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 MRPS27Q92552 414 aaKnown RBP15.55■□□□□ 0.08
CCDC40-209ENST00000573474 CLIC6Q96NY7 704 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 BTBD7Q9P203 1132 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 RIPK3Q9Y572 518 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 TLL2Q9Y6L7 1015 aa15.55■□□□□ 0.08
CCDC40-209ENST00000573474 CYP3A7-CYP3A51PA0A087WV96 503 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 BTBD19C9JJ37 291 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 PDHXO00330 501 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 NEMFO60524 1076 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 CYP3A4P08684 503 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 LIG1P18858 919 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 CYP3A7P24462 503 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 PRPHP41219 470 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 RESP18Q5W5W9 173 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 CAVIN1Q6NZI2 390 aaKnown RBP15.54■□□□□ 0.08
CCDC40-209ENST00000573474 CCDC73Q6ZRK6 1079 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 RIOX2Q8IUF8 465 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 SYAP1Q96A49 352 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-209ENST00000573474 TMEM60Q9H2L4 133 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 ACAD9Q9H845 621 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 RABGAP1Q9Y3P9 1069 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 MRVI1Q9Y6F6 885 aa15.54■□□□□ 0.08
CCDC40-209ENST00000573474 SMCHD1A6NHR9 2005 aa15.53■□□□□ 0.08
CCDC40-209ENST00000573474 TESPA1A2RU30 521 aaPredicted RBP15.53■□□□□ 0.08
CCDC40-209ENST00000573474 CNMDO75829 334 aa15.53■□□□□ 0.08
CCDC40-209ENST00000573474 OR52Z1P0C646 297 aa15.53■□□□□ 0.08
CCDC40-209ENST00000573474 COPB2P35606 906 aa15.53■□□□□ 0.08
CCDC40-209ENST00000573474 FSTL1Q12841 308 aa15.53■□□□□ 0.08
CCDC40-209ENST00000573474 RNF207Q6ZRF8 634 aa15.53■□□□□ 0.08
CCDC40-209ENST00000573474 SYTL5Q8TDW5 730 aaPredicted RBP15.53■□□□□ 0.08
CCDC40-209ENST00000573474 MBOAT7Q96N66 472 aa15.53■□□□□ 0.08
CCDC40-209ENST00000573474 PAGR1Q9BTK6 254 aa15.53■□□□□ 0.08
CCDC40-209ENST00000573474 SPATC1LQ9H0A9 340 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms