RNA–Protein interactions for RNA: ENST00000569095.1

CDH11-215, Transcript of cadherin 11, human

TSL 3

Gene CDH11, Length 436 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH11-215	ENST00000569095	ENDOU	P21128	410 aa	Known RBP	4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	GLDC	P23378	1020 aa		4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	SEPHS1	P49903	392 aa		4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	DLG4	P78352	724 aa		4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	CIAPIN1	Q6FI81	312 aa		4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	NAT16	Q8N8M0	369 aa		4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	BTN2A2	Q8WVV5	523 aa		4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	MRGPRX3	Q96LB0	322 aa		4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	CCDC140	Q96MF4	163 aa		4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	FCRL3	Q96P31	734 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	CYP26B1	Q9NR63	512 aa		4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	AP5S1	Q9NUS5	200 aa		4.88	□□□□□ -1.63
CDH11-215	ENST00000569095	TLDC2	A0PJX2	215 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	OR14I1	A6ND48	311 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	C2orf71	A6NGG8	1288 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	STXBP3	O00186	592 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	PRODH	O43272	600 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	TBX1	O43435	398 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	NRDC	O43847	1150 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	FAM153B	P0C7A2	387 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	HOXC12	P31275	282 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	ECI1	P42126	302 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	RTP1	P59025	263 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	SCRN1	Q12765	414 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	GIMAP6	Q6P9H5	292 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	THAP3	Q8WTV1	239 aa	Predicted RBP	4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	FCRL2	Q96LA5	508 aa	Predicted RBP	4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	SLC12A9	Q9BXP2	914 aa		4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	TMA7	Q9Y2S6	64 aa	Known RBP	4.87	□□□□□ -1.63
CDH11-215	ENST00000569095	AURKA	O14965	403 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	ZNF205	O95201	554 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	TBC1D8	O95759	1140 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	CP	P00450	1065 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	IFNGR1	P15260	489 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	GRIA2	P42262	883 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	KIR2DL1	P43626	348 aa	Predicted RBP	4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	KIR2DL2	P43627	348 aa	Predicted RBP	4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	SRSF3	P84103	164 aa	Known RBP	4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	SSPN	Q14714	243 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	SNX17	Q15036	470 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	HSF5	Q4G112	596 aa	Predicted RBP	4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	NSMF	Q6X4W1	530 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	SH3TC2	Q8TF17	1288 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	KCTD13	Q8WZ19	329 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	IER2	Q9BTL4	223 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	NKX2-4	Q9H2Z4	354 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	ZNF552	Q9H707	407 aa	Predicted RBP	4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	GCM1	Q9NP62	436 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	GPRC5C	Q9NQ84	441 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	ERVK13-1	Q9NX77	482 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	BACE2	Q9Y5Z0	518 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	TAF6L	Q9Y6J9	622 aa		4.86	□□□□□ -1.63
CDH11-215	ENST00000569095	TRBV23-1	A0A0A0MS06	115 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	FADS2P1	A8MWK0	482 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	NUDT19	A8MXV4	375 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	CLSTN1	O94985	981 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	PAM	P19021	973 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	L1CAM	P32004	1257 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	EPHB3	P54753	998 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	SF1	Q15637	639 aa	Known RBP	4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	LONRF2	Q1L5Z9	754 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	C2orf27A	Q580R0	203 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	RTP2	Q5QGT7	225 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	HLA-DQA1	Q5Y7H0	255 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	EEF1DP3	Q658K8	133 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	JAML	Q86YT9	394 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	SCUBE1	Q8IWY4	988 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	ZSWIM2	Q8NEG5	633 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	NUP43	Q8NFH3	380 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	MCMBP	Q9BTE3	642 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	ARHGEF4	Q9NR80	690 aa		4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	CNOT6	Q9ULM6	557 aa	Known RBP	4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	MRPL42	Q9Y6G3	142 aa	Known RBP	4.85	□□□□□ -1.63
CDH11-215	ENST00000569095	TEX51	A0A1B0GUA7	166 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095		A0A1W2PQ27	194 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095		A0A1W2PQ64	194 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095		A0A1W2PQC6	194 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095		A0A1W2PQD8	194 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	SMARCA5	O60264	1052 aa	Predicted RBP	4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	PEX10	O60683	326 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	SEMA7A	O75326	666 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	FGFR1	P11362	822 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	PABPC1	P11940	636 aa	Known RBP	4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	PRKCA	P17252	672 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	PI3	P19957	117 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	VIPR1	P32241	457 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	CEBPA	P49715	358 aa	Predicted RBP	4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	PRSS53	Q2L4Q9	553 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	KRTAP19-4	Q3LI73	84 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	FAM209A	Q5JX71	171 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	USP53	Q70EK8	1073 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	PANK1	Q8TE04	598 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	RNPC3	Q96LT9	517 aa	Known RBP	4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	PTCHD1	Q96NR3	888 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	JMJD8	Q96S16	334 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	DHRS4	Q9BTZ2	278 aa		4.84	□□□□□ -1.63
CDH11-215	ENST00000569095	SIRT5	Q9NXA8	310 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms