RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 LRRC63Q05C16 580 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 IFI16Q16666 785 aaKnown RBP8.53□□□□□ -1.04
ATXN3-250ENST00000568290 LONRF2Q1L5Z9 754 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 MUM1L1Q5H9M0 696 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 PDXDC2PQ6P474 469 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 TOGARAM2Q6ZUX3 1019 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 SV2BQ7L1I2 683 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 NEK8Q86SG6 692 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 TRMT44Q8IYL2 757 aaKnown RBP8.53□□□□□ -1.04
ATXN3-250ENST00000568290 SYNE4Q8N205 404 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 MB21D1Q8N884 522 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 GIMAP8Q8ND71 665 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-250ENST00000568290 GOLGA5Q8TBA6 731 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 CPLX3Q8WVH0 158 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATXN3-250ENST00000568290 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-250ENST00000568290 SLC4A9Q96Q91 983 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 EIF3CQ99613 913 aaKnown RBP8.53□□□□□ -1.04
ATXN3-250ENST00000568290 DNAJC7Q99615 494 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 NT5C3AQ9H0P0 336 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 LZTFL1Q9NQ48 299 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 INTS13Q9NVM9 706 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 NARFQ9UHQ1 456 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 SUGT1Q9Y2Z0 365 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 SAR1BQ9Y6B6 198 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 AHDC1Q5TGY3 1603 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-250ENST00000568290 KDM3AQ9Y4C1 1321 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 SOWAHDA6NJG2 315 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 NUTM2BA6NNL0 878 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-250ENST00000568290 NUTM2EB1AL46 878 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-250ENST00000568290 FOXN1O15353 648 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 RPS6KA4O75676 772 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 PLEKHA8P1O95397 391 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 GYPCP04921 128 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 TCP1P17987 556 aaKnown RBP8.52□□□□□ -1.05
ATXN3-250ENST00000568290 MTIF2P46199 727 aaKnown RBP8.52□□□□□ -1.05
ATXN3-250ENST00000568290 GYG1P46976 350 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 STX17P56962 302 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 TFAP4Q01664 338 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 APBA1Q02410 837 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 TBC1D8BQ0IIM8 1120 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 MAP2K5Q13163 448 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 PDIA5Q14554 519 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 KARSQ15046 597 aaKnown RBP8.52□□□□□ -1.05
ATXN3-250ENST00000568290 VWA3BQ502W6 1294 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 GLE1Q53GS7 698 aaKnown RBP8.52□□□□□ -1.05
ATXN3-250ENST00000568290 C12orf60Q5U649 245 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 CABP7Q86V35 215 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 SRBD1Q8N5C6 995 aaKnown RBP8.52□□□□□ -1.05
ATXN3-250ENST00000568290 CSGALNACT2Q8N6G5 542 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 CAGE1Q8TC20 777 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 P2RX5Q93086 422 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 CCDC42Q96M95 316 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 C7orf25Q9BPX7 421 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 CRACR2AQ9BSW2 395 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 ZMYND12Q9H0C1 365 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 DEF6Q9H4E7 631 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 KBTBD4Q9NVX7 518 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 XDHP47989 1333 aa8.52□□□□□ -1.05
ATXN3-250ENST00000568290 MAP2K7O14733 419 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 OPA1O60313 960 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 SRGNP10124 158 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 ATP2B4P23634 1241 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 ANXA13P27216 316 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 OAS2P29728 719 aaKnown RBP8.51□□□□□ -1.05
ATXN3-250ENST00000568290 CCT6AP40227 531 aaKnown RBP8.51□□□□□ -1.05
ATXN3-250ENST00000568290 NAPAP54920 295 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 PDE4DQ08499 809 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 CLUL1Q15846 466 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 MEA1Q16626 185 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 ZNF827Q17R98 1081 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 ASPRV1Q53RT3 343 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 CCDC122Q5T0U0 273 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 C10orf76Q5T2E6 689 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 KRT79Q5XKE5 535 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 GBP6Q6ZN66 633 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 SLC35F6Q8N357 371 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 RNF10Q8N5U6 811 aaKnown RBP8.51□□□□□ -1.05
ATXN3-250ENST00000568290 SECISBP2LQ93073 1101 aaKnown RBP8.51□□□□□ -1.05
ATXN3-250ENST00000568290 JAKMIP2Q96AA8 810 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 ERGIC2Q96RQ1 377 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 WDR24Q96S15 920 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 RUFY1Q96T51 708 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 TUBGCP2Q9BSJ2 902 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 NOC4LQ9BVI4 516 aaKnown RBP8.51□□□□□ -1.05
ATXN3-250ENST00000568290 TMX4Q9H1E5 349 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-250ENST00000568290 VPS16Q9H269 839 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 ZHX1Q9UKY1 873 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-250ENST00000568290 RTCBQ9Y3I0 505 aaKnown RBP8.51□□□□□ -1.05
ATXN3-250ENST00000568290 JRKLQ9Y4A0 524 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 DAAM1Q9Y4D1 1078 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 MYO3BQ8WXR4 1341 aa8.51□□□□□ -1.05
ATXN3-250ENST00000568290 MAST2Q6P0Q8 1798 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 XIRP1Q702N8 1843 aaKnown RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 IRF6O14896 467 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 TEX33O43247 280 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 MARCH6O60337 910 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 TBC1D8O95759 1140 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 PRCPP42785 496 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 PLA2G4AP47712 749 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms