RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZXDAP98168 799 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 TAGLNQ01995 201 aaKnown RBP4.3□□□□□ -1.72
SMG1-212ENST00000566328 DLX2Q07687 328 aaPredicted RBP4.3□□□□□ -1.72
SMG1-212ENST00000566328 KIAA2012Q0VF49 1180 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 DCAF15Q66K64 600 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 CPZQ66K79 652 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 FAM124AQ86V42 546 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 KIAA0825Q8IV33 1275 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 LZTR1Q8N653 840 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 TTC9BQ8N6N2 239 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 NETO2Q8NC67 525 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 BRF1Q92994 677 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 SAMD11Q96NU1 681 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 SRRDQ9UH36 339 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 DUSP10Q9Y6W6 482 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 C1QTNF3-AMACRE9PGA6 284 aa4.29□□□□□ -1.72
SMG1-212ENST00000566328 SMARCA5O60264 1052 aaPredicted RBP4.29□□□□□ -1.72
SMG1-212ENST00000566328 TNFRSF1AP19438 455 aa4.29□□□□□ -1.72
SMG1-212ENST00000566328 CACNB2Q08289 660 aaPredicted RBP4.29□□□□□ -1.72
SMG1-212ENST00000566328 ZNF326Q5BKZ1 582 aaKnown RBP4.29□□□□□ -1.72
SMG1-212ENST00000566328 AXDND1Q5T1B0 1012 aaPredicted RBP4.29□□□□□ -1.72
SMG1-212ENST00000566328 TDRD10Q5VZ19 366 aaKnown RBP4.29□□□□□ -1.72
SMG1-212ENST00000566328 RCSD1Q6JBY9 416 aa4.29□□□□□ -1.72
SMG1-212ENST00000566328 ZNF761Q86XN6 746 aaPredicted RBP4.29□□□□□ -1.72
SMG1-212ENST00000566328 SMARCC2Q8TAQ2 1214 aa4.29□□□□□ -1.72
SMG1-212ENST00000566328 USP33Q8TEY7 942 aa4.29□□□□□ -1.72
SMG1-212ENST00000566328 FERD3LQ96RJ6 166 aa4.29□□□□□ -1.72
SMG1-212ENST00000566328 SPON2Q9BUD6 331 aa4.29□□□□□ -1.72
SMG1-212ENST00000566328 C1QTNF3Q9BXJ4 246 aa4.29□□□□□ -1.72
SMG1-212ENST00000566328 NOL6Q9H6R4 1146 aaKnown RBP4.29□□□□□ -1.72
SMG1-212ENST00000566328 PLA2G2DQ9UNK4 145 aa4.29□□□□□ -1.72
SMG1-212ENST00000566328 AKAP8O43823 692 aaKnown RBP4.28□□□□□ -1.72
SMG1-212ENST00000566328 PLATP00750 562 aa4.28□□□□□ -1.72
SMG1-212ENST00000566328 TP53P04637 393 aaPredicted RBP4.28□□□□□ -1.72
SMG1-212ENST00000566328 IFNGR1P15260 489 aa4.28□□□□□ -1.72
SMG1-212ENST00000566328 GUCY2CP25092 1073 aa4.28□□□□□ -1.72
SMG1-212ENST00000566328 ZBTB8AQ96BR9 441 aa4.28□□□□□ -1.72
SMG1-212ENST00000566328 LOXL4Q96JB6 756 aa4.28□□□□□ -1.72
SMG1-212ENST00000566328 ZDHHC15Q96MV8 337 aa4.28□□□□□ -1.72
SMG1-212ENST00000566328 RBM15Q96T37 977 aaKnown RBP eCLIP4.28□□□□□ -1.72
SMG1-212ENST00000566328 ZNF451Q9Y4E5 1061 aa4.28□□□□□ -1.72
SMG1-212ENST00000566328 TRBV23OR9-2A0A075B6M9 112 aa4.27□□□□□ -1.73
SMG1-212ENST00000566328 CYP2C8P10632 490 aa4.27□□□□□ -1.73
SMG1-212ENST00000566328 SEPHS1P49903 392 aa4.27□□□□□ -1.73
SMG1-212ENST00000566328 BORAQ6PGQ7 559 aa4.27□□□□□ -1.73
SMG1-212ENST00000566328 UNC5AQ6ZN44 842 aa4.27□□□□□ -1.73
SMG1-212ENST00000566328 PPFIBP1Q86W92 1011 aa4.27□□□□□ -1.73
SMG1-212ENST00000566328 LGI4Q8N135 537 aa4.27□□□□□ -1.73
SMG1-212ENST00000566328 CHST13Q8NET6 341 aa4.27□□□□□ -1.73
SMG1-212ENST00000566328 ADAMTS17Q8TE56 1095 aa4.27□□□□□ -1.73
SMG1-212ENST00000566328 WHRNQ9P202 907 aa4.27□□□□□ -1.73
SMG1-212ENST00000566328 ZNF214Q9UL59 606 aaPredicted RBP4.27□□□□□ -1.73
SMG1-212ENST00000566328 AURKAO14965 403 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 MATN3O15232 486 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 SUV39H1O43463 412 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 ZNF20P17024 532 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 PPP2R5DQ14738 602 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 CCDC27Q2M243 656 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 FBXW10Q5XX13 1052 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 LINC00482Q8N8I6 264 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 RBBP8NLQ8NC74 664 aaPredicted RBP4.26□□□□□ -1.73
SMG1-212ENST00000566328 C8orf49Q96NF6 230 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 GBP3Q9H0R5 595 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 RXFP1Q9HBX9 757 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 SPATA6Q9NWH7 488 aaPredicted RBP4.26□□□□□ -1.73
SMG1-212ENST00000566328 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.26□□□□□ -1.73
SMG1-212ENST00000566328 RWDD3Q9Y3V2 267 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 SLC12A7Q9Y666 1083 aa4.26□□□□□ -1.73
SMG1-212ENST00000566328 PPM1BO75688 479 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 FSHBP01225 129 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 PAMP19021 973 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 RPL13P26373 211 aaKnown RBP4.25□□□□□ -1.73
SMG1-212ENST00000566328 KRTAP1-1Q07627 177 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 MRPL58Q14197 206 aaKnown RBP4.25□□□□□ -1.73
SMG1-212ENST00000566328 RGL3Q3MIN7 710 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 FAM26FQ5R3K3 315 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 WWC2Q6AWC2 1192 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 GLB1LQ6UWU2 654 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 DVL3Q92997 716 aaPredicted RBP4.25□□□□□ -1.73
SMG1-212ENST00000566328 DDX11Q96FC9 970 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 NOX5Q96PH1 765 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 BCL2L13Q9BXK5 485 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 BCAS3Q9H6U6 928 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 FAM86C1Q9NVL1 165 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 BACE2Q9Y5Z0 518 aa4.25□□□□□ -1.73
SMG1-212ENST00000566328 ZNF536O15090 1300 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 NPHP3-ACAD11A0A0J9YXS1 232 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 C2orf71A6NGG8 1288 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 MROH6A6NGR9 719 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 NPHS1O60500 1241 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 PDIA4P13667 645 aaKnown RBP4.24□□□□□ -1.73
SMG1-212ENST00000566328 GDF5P43026 501 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 SMAD4Q13485 552 aaKnown RBP4.24□□□□□ -1.73
SMG1-212ENST00000566328 SURF1Q15526 300 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 TBC1D10BQ4KMP7 808 aaPredicted RBP4.24□□□□□ -1.73
SMG1-212ENST00000566328 HEATR6Q6AI08 1181 aaKnown RBP4.24□□□□□ -1.73
SMG1-212ENST00000566328 ADAT2Q7Z6V5 191 aaKnown RBP4.24□□□□□ -1.73
SMG1-212ENST00000566328 ZC3H18Q86VM9 953 aaKnown RBP4.24□□□□□ -1.73
SMG1-212ENST00000566328 DCP2Q8IU60 420 aaKnown RBP4.24□□□□□ -1.73
SMG1-212ENST00000566328 TTLL6Q8N841 843 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms