RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 BCAS3Q9H6U6 928 aa5.09□□□□□ -1.59
CHD9-211ENST00000564600 PHAXQ9H814 394 aaKnown RBP5.09□□□□□ -1.59
CHD9-211ENST00000564600 TNFRSF12AQ9NP84 129 aa5.09□□□□□ -1.59
CHD9-211ENST00000564600 TNFRSF10DQ9UBN6 386 aa5.09□□□□□ -1.59
CHD9-211ENST00000564600 APEX2Q9UBZ4 518 aa5.09□□□□□ -1.59
CHD9-211ENST00000564600 FGF10O15520 208 aaPredicted RBP5.08□□□□□ -1.6
CHD9-211ENST00000564600 CD3EP07766 207 aa5.08□□□□□ -1.6
CHD9-211ENST00000564600 ITGA4P13612 1032 aa5.08□□□□□ -1.6
CHD9-211ENST00000564600 RBM25P49756 843 aaKnown RBP5.08□□□□□ -1.6
CHD9-211ENST00000564600 CASP7P55210 303 aa5.08□□□□□ -1.6
CHD9-211ENST00000564600 SLC7A5Q01650 507 aa5.08□□□□□ -1.6
CHD9-211ENST00000564600 VWA3BQ502W6 1294 aa5.08□□□□□ -1.6
CHD9-211ENST00000564600 UBXN11Q5T124 520 aa5.08□□□□□ -1.6
CHD9-211ENST00000564600 KIAA1211LQ6NV74 962 aa5.08□□□□□ -1.6
CHD9-211ENST00000564600 GALNT18Q6P9A2 607 aa5.08□□□□□ -1.6
CHD9-211ENST00000564600 ZNF526Q8TF50 670 aaPredicted RBP5.08□□□□□ -1.6
CHD9-211ENST00000564600 RXFP1Q9HBX9 757 aa5.08□□□□□ -1.6
CHD9-211ENST00000564600 CAPN10Q9HC96 672 aa5.08□□□□□ -1.6
CHD9-211ENST00000564600 SMAD7O15105 426 aaKnown RBP5.07□□□□□ -1.6
CHD9-211ENST00000564600 ATF2P15336 505 aa5.07□□□□□ -1.6
CHD9-211ENST00000564600 ARL4AP40617 200 aa5.07□□□□□ -1.6
CHD9-211ENST00000564600 CWF19L1Q69YN2 538 aaKnown RBP5.07□□□□□ -1.6
CHD9-211ENST00000564600 HEATR6Q6AI08 1181 aaKnown RBP5.07□□□□□ -1.6
CHD9-211ENST00000564600 VHLLQ6RSH7 139 aa5.07□□□□□ -1.6
CHD9-211ENST00000564600 OR6P1Q8NGX9 317 aa5.07□□□□□ -1.6
CHD9-211ENST00000564600 MICAL1Q8TDZ2 1067 aa5.07□□□□□ -1.6
CHD9-211ENST00000564600 TINF2Q9BSI4 451 aa5.07□□□□□ -1.6
CHD9-211ENST00000564600 USP40Q9NVE5 1235 aa5.07□□□□□ -1.6
CHD9-211ENST00000564600 WHRNQ9P202 907 aa5.07□□□□□ -1.6
CHD9-211ENST00000564600 WTIPA6NIX2 430 aaPredicted RBP5.06□□□□□ -1.6
CHD9-211ENST00000564600 B2RBV5 119 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 K7ESM1 405 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 STXBP3O00186 592 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 IGFBP6P24592 240 aaPredicted RBP5.06□□□□□ -1.6
CHD9-211ENST00000564600 TACR1P25103 407 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 CNR2P34972 360 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 ETFBP38117 255 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 MVKQ03426 396 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 TCEAL1Q15170 157 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 DPY19L1Q2PZI1 675 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 OLFML2BQ68BL8 750 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 ADAT2Q7Z6V5 191 aaKnown RBP5.06□□□□□ -1.6
CHD9-211ENST00000564600 IGSF5Q9NSI5 407 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 FBLN5Q9UBX5 448 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 CGGBP1Q9UFW8 167 aaPredicted RBP5.06□□□□□ -1.6
CHD9-211ENST00000564600 ACSL6Q9UKU0 697 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 SLC12A7Q9Y666 1083 aa5.06□□□□□ -1.6
CHD9-211ENST00000564600 A0A087WZG4 1122 aa5.05□□□□□ -1.6
CHD9-211ENST00000564600 A0A1W2PQ45 241 aaPredicted RBP5.05□□□□□ -1.6
CHD9-211ENST00000564600 A0A1W2PQY0 241 aa5.05□□□□□ -1.6
CHD9-211ENST00000564600 ABLIM1O14639 778 aa5.05□□□□□ -1.6
CHD9-211ENST00000564600 PPP1R11O60927 126 aaPredicted RBP5.05□□□□□ -1.6
CHD9-211ENST00000564600 ZC3H14Q6PJT7 736 aaKnown RBP5.05□□□□□ -1.6
CHD9-211ENST00000564600 ARHGEF39Q8N4T4 335 aa5.05□□□□□ -1.6
CHD9-211ENST00000564600 NAT16Q8N8M0 369 aa5.05□□□□□ -1.6
CHD9-211ENST00000564600 FNIP1Q8TF40 1166 aa5.05□□□□□ -1.6
CHD9-211ENST00000564600 BORCS6Q96GS4 357 aa5.05□□□□□ -1.6
CHD9-211ENST00000564600 PTCHD1Q96NR3 888 aa5.05□□□□□ -1.6
CHD9-211ENST00000564600 DIS3Q9Y2L1 958 aaKnown RBP5.05□□□□□ -1.6
CHD9-211ENST00000564600 SF3B6Q9Y3B4 125 aaKnown RBP5.05□□□□□ -1.6
CHD9-211ENST00000564600 AURKAO14965 403 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 TBX1O43435 398 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 FSHBP01225 129 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 FGRP09769 529 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 TNFRSF1AP19438 455 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 ZXDAP98168 799 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 FOXO4P98177 505 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 POU4F1Q01851 419 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 CYP4F3Q08477 520 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 ZNF827Q17R98 1081 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 MRM1Q6IN84 353 aaKnown RBP5.04□□□□□ -1.6
CHD9-211ENST00000564600 C6orf15Q6UXA7 325 aaPredicted RBP5.04□□□□□ -1.6
CHD9-211ENST00000564600 LIPIQ6XZB0 460 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 MCF2L2Q86YR7 1114 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 STRIP2Q9ULQ0 834 aa5.04□□□□□ -1.6
CHD9-211ENST00000564600 IRS2Q9Y4H2 1338 aa5.03□□□□□ -1.6
CHD9-211ENST00000564600 MATN3O15232 486 aa5.03□□□□□ -1.6
CHD9-211ENST00000564600 PPM1BO75688 479 aa5.03□□□□□ -1.6
CHD9-211ENST00000564600 NOP2P46087 812 aaKnown RBP5.03□□□□□ -1.6
CHD9-211ENST00000564600 DLX2Q07687 328 aaPredicted RBP5.03□□□□□ -1.6
CHD9-211ENST00000564600 LAPTM5Q13571 262 aa5.03□□□□□ -1.6
CHD9-211ENST00000564600 RCC1LQ96I51 464 aaKnown RBP5.03□□□□□ -1.6
CHD9-211ENST00000564600 SCAND2PQ9GZW5 306 aaPredicted RBP5.03□□□□□ -1.6
CHD9-211ENST00000564600 GBP3Q9H0R5 595 aa5.03□□□□□ -1.6
CHD9-211ENST00000564600 ZNF408Q9H9D4 720 aa5.03□□□□□ -1.6
CHD9-211ENST00000564600 PODXL2Q9NZ53 605 aa5.03□□□□□ -1.6
CHD9-211ENST00000564600 SUGT1Q9Y2Z0 365 aa5.03□□□□□ -1.6
CHD9-211ENST00000564600 PMF1-BGLAPU3KQ54 211 aa5.03□□□□□ -1.6
CHD9-211ENST00000564600 ANKRD34BA5PLL1 514 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 SUV39H1O43463 412 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 ENDOUP21128 410 aaKnown RBP5.02□□□□□ -1.61
CHD9-211ENST00000564600 FBLN1P23142 703 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 MAGEA10P43363 369 aaPredicted RBP5.02□□□□□ -1.61
CHD9-211ENST00000564600 MAPKAPK2P49137 400 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 ADAM17P78536 824 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 CBX2Q14781 532 aaPredicted RBP5.02□□□□□ -1.61
CHD9-211ENST00000564600 HLA-DQA1Q5Y7H0 255 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 LARP1BQ659C4 914 aaKnown RBP5.02□□□□□ -1.61
CHD9-211ENST00000564600 MBLAC2Q68D91 279 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 BICRALQ6AI39 1079 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms