RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 RUBCNQ92622 972 aa14.61□□□□□ -0.07
USB1-207ENST00000563149 RRP36Q96EU6 259 aaKnown RBP14.61□□□□□ -0.07
USB1-207ENST00000563149 STK17AQ9UEE5 414 aa14.61□□□□□ -0.07
USB1-207ENST00000563149 RASSF10A6NK89 507 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 RPS6KA5O75582 802 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 ATP1A1P05023 1023 aaKnown RBP14.6□□□□□ -0.07
USB1-207ENST00000563149 ACTN2P35609 894 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 VAV2P52735 878 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 ZSCAN26Q16670 478 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 LETM2Q2VYF4 491 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 MIIPQ5JXC2 388 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 CENPPQ6IPU0 288 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 C16orf86Q6ZW13 317 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 ZNF804AQ7Z570 1209 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 LRRC15Q8TF66 581 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 TGFBRAP1Q8WUH2 860 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 LRRC27Q9C0I9 530 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 AGPAT5Q9NUQ2 364 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 VPS18Q9P253 973 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 TRIM10Q9UDY6 481 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 STX8Q9UNK0 236 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 NUTM2BA6NNL0 878 aaPredicted RBP14.6□□□□□ -0.07
USB1-207ENST00000563149 NUTM2EB1AL46 878 aaPredicted RBP14.6□□□□□ -0.07
USB1-207ENST00000563149 USO1O60763 962 aaKnown RBP14.6□□□□□ -0.07
USB1-207ENST00000563149 PRLRP16471 622 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 PLCG2P16885 1265 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 KCNA4P22459 653 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 NOVP48745 357 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 LMAN1P49257 510 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 AARSP49588 968 aaKnown RBP eCLIP14.6□□□□□ -0.07
USB1-207ENST00000563149 KIF5AQ12840 1032 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 STK4Q13043 487 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 SV2BQ7L1I2 683 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 FNBP4Q8N3X1 1017 aaPredicted RBP14.6□□□□□ -0.07
USB1-207ENST00000563149 PLIN2Q99541 437 aa14.6□□□□□ -0.07
USB1-207ENST00000563149 SEC63Q9UGP8 760 aaKnown RBP14.6□□□□□ -0.07
USB1-207ENST00000563149 IVLP07476 585 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 CDK8P49336 464 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 ITIH3Q06033 890 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 GRAPQ13588 217 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 SPA17Q15506 151 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 CCDC70Q6NSX1 233 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 LEKR1Q6ZMV7 388 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 ARHGAP27Q6ZUM4 889 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 UNC13DQ70J99 1090 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 TRIM58Q8NG06 486 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 GRAPLQ8TC17 118 aaPredicted RBP14.59□□□□□ -0.07
USB1-207ENST00000563149 PCMTD1Q96MG8 357 aaPredicted RBP14.59□□□□□ -0.07
USB1-207ENST00000563149 MMS19Q96T76 1030 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 EYA3Q99504 573 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 EDEM3Q9BZQ6 932 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 PLAGL2Q9UPG8 496 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 SBF2Q86WG5 1849 aa14.59□□□□□ -0.07
USB1-207ENST00000563149 ENC1O14682 589 aa14.58□□□□□ -0.08
USB1-207ENST00000563149 TFRCP02786 760 aaKnown RBP14.58□□□□□ -0.08
USB1-207ENST00000563149 FXR2P51116 673 aaKnown RBP eCLIP14.58□□□□□ -0.08
USB1-207ENST00000563149 PSMD2Q13200 908 aa14.58□□□□□ -0.08
USB1-207ENST00000563149 ZNF572Q7Z3I7 529 aaPredicted RBP14.58□□□□□ -0.08
USB1-207ENST00000563149 CCDC84Q86UT8 332 aaPredicted RBP14.58□□□□□ -0.08
USB1-207ENST00000563149 GUF1Q8N442 669 aaKnown RBP14.58□□□□□ -0.08
USB1-207ENST00000563149 SECISBP2LQ93073 1101 aaKnown RBP14.58□□□□□ -0.08
USB1-207ENST00000563149 CCDC42Q96M95 316 aa14.58□□□□□ -0.08
USB1-207ENST00000563149 MMTAG2Q9BU76 263 aaKnown RBP14.58□□□□□ -0.08
USB1-207ENST00000563149 RTFDC1Q9BY42 306 aaPredicted RBP14.58□□□□□ -0.08
USB1-207ENST00000563149 RAB34Q9BZG1 259 aa14.58□□□□□ -0.08
USB1-207ENST00000563149 SNED1Q8TER0 1413 aa14.58□□□□□ -0.08
USB1-207ENST00000563149 GPR75-ASB3A0A0A6YYF3 556 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 LRRIQ3A6PVS8 624 aaPredicted RBP14.57□□□□□ -0.08
USB1-207ENST00000563149 TACC1O75410 805 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 LCA5LO95447 670 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 TECP42680 631 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 LRRC63Q05C16 580 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 PDIA5Q14554 519 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 MAN2A1Q16706 1144 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 TMEM266Q2M3C6 531 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 SLC4A8Q2Y0W8 1093 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 VWA3BQ502W6 1294 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 SLF2Q8IX21 1173 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 TBCKQ8TEA7 893 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 CCDC102AQ96A19 550 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 MTMR9Q96QG7 549 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 RIOX1Q9H6W3 641 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 SUGCTQ9HAC7 445 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 ANKIB1Q9P2G1 1089 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 HDAC6Q9UBN7 1215 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 SRP68Q9UHB9 627 aaKnown RBP14.57□□□□□ -0.08
USB1-207ENST00000563149 FAN1Q9Y2M0 1017 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 JRKLQ9Y4A0 524 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 FCER1AP12319 257 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 MAPKAPK5Q8IW41 473 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 REXO1Q8N1G1 1221 aaKnown RBP14.57□□□□□ -0.08
USB1-207ENST00000563149 MMGT1Q8N4V1 131 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 KIAA0895Q8NCT3 520 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 FAM163AQ96GL9 167 aaPredicted RBP14.57□□□□□ -0.08
USB1-207ENST00000563149 LACRTQ9GZZ8 138 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 SEMA6BQ9H3T3 888 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 RIC8AQ9NPQ8 531 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 JAG2Q9Y219 1238 aa14.57□□□□□ -0.08
USB1-207ENST00000563149 RTCBQ9Y3I0 505 aaKnown RBP14.57□□□□□ -0.08
USB1-207ENST00000563149 DDX60LQ5H9U9 1706 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms