RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 RNF123Q5XPI4 1314 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 TYW5A2RUC4 315 aaKnown RBP14.76□□□□□ -0.05
TRAF3-208ENST00000560371 CLCN1P35523 988 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 APOA5Q6Q788 366 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 RSRC2Q7L4I2 434 aaKnown RBP14.76□□□□□ -0.05
TRAF3-208ENST00000560371 GCFC2P16383 781 aaKnown RBP14.76□□□□□ -0.05
TRAF3-208ENST00000560371 MAN1A1P33908 653 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 ITKQ08881 620 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 USP17L2Q6R6M4 530 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 TLR7Q9NYK1 1049 aaKnown RBP14.76□□□□□ -0.05
TRAF3-208ENST00000560371 RPS6KA4O75676 772 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 DIXDC1Q155Q3 683 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 RAB17Q9H0T7 212 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 FOXP1Q9H334 677 aaPredicted RBP14.75□□□□□ -0.05
TRAF3-208ENST00000560371 M0R2C6 588 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 CMA1P23946 247 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 SYMPKQ92797 1274 aaKnown RBP14.75□□□□□ -0.05
TRAF3-208ENST00000560371 GTPBP6O43824 516 aaPredicted RBP14.75□□□□□ -0.05
TRAF3-208ENST00000560371 KRT15P19012 456 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 MECOMQ03112 1051 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 SDCCAG8Q86SQ7 713 aaPredicted RBP14.75□□□□□ -0.05
TRAF3-208ENST00000560371 ANKRD36BP1Q96IX9 119 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 ZHX1Q9UKY1 873 aaPredicted RBP14.75□□□□□ -0.05
TRAF3-208ENST00000560371 SYDE2Q5VT97 1194 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 SUSD4Q5VX71 490 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 CROCCP2Q86T23 111 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 TRIML1Q8N9V2 468 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 ZNF341Q9BYN7 854 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 PCDHA4Q9UN74 947 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 C2orf69Q8N8R5 385 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 MAP4K1Q92918 833 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 CEP170P1Q96L14 293 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 AK8Q96MA6 479 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 STAP2Q9UGK3 403 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 ADKP55263 362 aaKnown RBP14.75□□□□□ -0.05
TRAF3-208ENST00000560371 RUFY4Q6ZNE9 571 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 C4orf50Q6ZRC1 276 aa14.75□□□□□ -0.05
TRAF3-208ENST00000560371 PTPREP23469 700 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 TRAPPC10P48553 1259 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 EEF2KMTQ96G04 330 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 MAGEF1Q9HAY2 307 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 PTK2Q05397 1052 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 NBPF11Q86T75 865 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 NACC1Q96RE7 527 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 TTC36A6NLP5 189 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 TMCO4Q5TGY1 634 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 XPO4Q9C0E2 1151 aaKnown RBP14.74□□□□□ -0.05
TRAF3-208ENST00000560371 RAB20Q9NX57 234 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 PARP2Q9UGN5 583 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 RBM6P78332 1123 aaKnown RBP14.74□□□□□ -0.05
TRAF3-208ENST00000560371 FOXP4Q8IVH2 680 aaPredicted RBP14.74□□□□□ -0.05
TRAF3-208ENST00000560371 EPSTI1Q96J88 318 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 CLIC6Q96NY7 704 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 KMT5AQ9NQR1 393 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 NLRP7Q8WX94 980 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 NOC2LQ9Y3T9 749 aaKnown RBP14.74□□□□□ -0.05
TRAF3-208ENST00000560371 EXOC3L4Q17RC7 722 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 DENND2CQ68D51 928 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 PDXDC2PQ6P474 469 aa14.74□□□□□ -0.05
TRAF3-208ENST00000560371 CDK12Q9NYV4 1490 aaPredicted RBP14.74□□□□□ -0.05
TRAF3-208ENST00000560371 SOS2Q07890 1332 aaPredicted RBP14.74□□□□□ -0.05
TRAF3-208ENST00000560371 CACTINQ8WUQ7 758 aaKnown RBP14.73□□□□□ -0.05
TRAF3-208ENST00000560371 PRPF31Q8WWY3 499 aaKnown RBP14.73□□□□□ -0.05
TRAF3-208ENST00000560371 LARP4BQ92615 738 aaKnown RBP14.73□□□□□ -0.05
TRAF3-208ENST00000560371 CUEDC2Q9H467 287 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 CCDC51Q96ER9 411 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 ZBTB7AO95365 584 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 LONRF2Q1L5Z9 754 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 METTL23Q86XA0 190 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 TBCKQ8TEA7 893 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 ABCD1P33897 745 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 FAM160B2Q86V87 743 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 TRIM58Q8NG06 486 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 RIPOR2Q9Y4F9 1068 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 TACC3Q9Y6A5 838 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 CSPG5O95196 566 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 FMNL1O95466 1100 aaPredicted RBP14.73□□□□□ -0.05
TRAF3-208ENST00000560371 KRBA2Q6ZNG9 492 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 CTAGE3PQ8IX95 158 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 LCORLQ8N3X6 602 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 RASGRP4Q8TDF6 673 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 ERO1AQ96HE7 468 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 CARD6Q9BX69 1037 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 BRD1O95696 1058 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 BPIFB4P59827 614 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 PAK2Q13177 524 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.73□□□□□ -0.05
TRAF3-208ENST00000560371 PCDHB4Q9Y5E5 795 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 ADGRL3Q9HAR2 1447 aa14.73□□□□□ -0.05
TRAF3-208ENST00000560371 POLR2FP61218 127 aaKnown RBP14.72□□□□□ -0.05
TRAF3-208ENST00000560371 TBC1D10BQ4KMP7 808 aaPredicted RBP14.72□□□□□ -0.05
TRAF3-208ENST00000560371 COA7Q96BR5 231 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 KRT12Q99456 494 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 ANTXR1Q9H6X2 564 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 SYNJ2BP-COX16A0A087WUM0 186 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 NDUFA8P51970 172 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 PALM2Q8IXS6 379 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 COX16Q9P0S2 106 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 ZSWIM5Q9P217 1185 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 NME8Q8N427 588 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms