RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GORABQ5T7V8 394 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 SCUBE1Q8IWY4 988 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 TMEM192Q8IY95 271 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 EXOC8Q8IYI6 725 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 AFAP1L2Q8N4X5 818 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 DTWD1Q8N5C7 304 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 LRRN4CLQ8ND94 238 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 KLHDC7BQ96G42 594 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 SUCOQ9UBS9 1254 aaKnown RBP6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 TJP2Q9UDY2 1190 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 SUSD2Q9UGT4 822 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 BAHCC1Q9P281 2608 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 PRODHO43272 600 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 ITGAVP06756 1048 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 H2AFB1P0C5Y9 115 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 H2AFB2P0C5Z0 115 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 GBP1P32455 592 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 DCCP43146 1447 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 TTF1Q15361 905 aaPredicted RBP6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 HEATR6Q6AI08 1181 aaKnown RBP6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 DDX46Q7L014 1031 aaKnown RBP6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 STRA8Q7Z7C7 330 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 WFDC8Q8IUA0 241 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 MCATQ8IVS2 390 aaKnown RBP6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 LEO1Q8WVC0 666 aaPredicted RBP6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 TMEM87BQ96K49 555 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 C8orf48Q96LL4 319 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 FGD4Q96M96 766 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 HAUS7Q99871 368 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 WDR18Q9BV38 432 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 LGR4Q9BXB1 951 aa6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 MRPL4Q9BYD3 311 aaKnown RBP6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 GEMIN8Q9NWZ8 242 aaKnown RBP6.46□□□□□ -1.38
MTHFD1-216ENST00000557539 NEXMIFQ5QGS0 1516 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 DNAJC25-GNG10A0A024R161 153 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 C9IYK1 514 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 RGS13O14921 159 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 PLSCR1O15162 318 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 AOC2O75106 756 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 KATNA1O75449 491 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 CPEP16870 476 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 NOS3P29474 1203 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 EPHB1P54762 984 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 SUMO1P63165 101 aaKnown RBP6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 RING1Q06587 406 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 HP1BP3Q5SSJ5 553 aaPredicted RBP6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 SLFN12Q8IYM2 578 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 RIN3Q8TB24 985 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 WFDC12Q8WWY7 111 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 TP53INP1Q96A56 240 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 DPH2Q9BQC3 489 aaPredicted RBP6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 RAD18Q9NS91 495 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 INTS7Q9NVH2 962 aaKnown RBP6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 APEX2Q9UBZ4 518 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 SFMBT1Q9UHJ3 866 aa6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 CHD2O14647 1828 aaKnown RBP6.45□□□□□ -1.38
MTHFD1-216ENST00000557539 LOC100289279A0A1B0GTE1 492 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 DDX3YO15523 660 aaKnown RBP6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 CLEC3AO75596 197 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 UBOX5O94941 541 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 PABPC1P11940 636 aaKnown RBP6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 IREB2P48200 963 aaKnown RBP6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 STRN3Q13033 797 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 PPP2R5AQ15172 486 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 NFE2Q16621 373 aaPredicted RBP6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 ZBTB37Q5TC79 503 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 NSMFQ6X4W1 530 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 ADAT2Q7Z6V5 191 aaKnown RBP6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 ZNF227Q86WZ6 799 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 HID1Q8IV36 788 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 CCDC144CPQ8IYA2 1237 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 KLHL23Q8NBE8 558 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 MORC4Q8TE76 937 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 DDX1Q92499 740 aaKnown RBP6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 CCDC74BQ96LY2 380 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 PCDHGC5Q9Y5F6 944 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 CNTNAP1P78357 1384 aa6.44□□□□□ -1.38
MTHFD1-216ENST00000557539 FANCGO15287 622 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 TSPAN6O43657 245 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 DNAJC8O75937 253 aaPredicted RBP6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 RASGRP1O95267 797 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 DLGAP3O95886 979 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 FGFR1P11362 822 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 GRIA2P42262 883 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 ERVK-24P63145 666 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 ID3Q02535 119 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 MAP7Q14244 749 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 SLC6A19Q695T7 634 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 IGF2-ASQ6U949 168 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 PPM1KQ8N3J5 372 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 BAHD1Q8TBE0 780 aaPredicted RBP6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 ZNF507Q8TCN5 953 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 PMM1Q92871 262 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 SMARCC1Q92922 1105 aaPredicted RBP6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 MEGF10Q96KG7 1140 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 ZNF512BQ96KM6 892 aaPredicted RBP6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 FBRSQ9HAH7 460 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 NDOR1Q9UHB4 597 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 CHD8Q9HCK8 2581 aa6.43□□□□□ -1.38
MTHFD1-216ENST00000557539 PIEZO1Q92508 2521 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms