RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 IVNS1ABPQ9Y6Y0 642 aa14.76□□□□□ -0.05
SHMT2-227ENST00000557269 CASP8AP2Q9UKL3 1982 aa14.76□□□□□ -0.05
SHMT2-227ENST00000557269 DOCK3Q8IZD9 2030 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 SOWAHBA6NEL2 793 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 FLT3LGP49771 235 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 HMGN5P82970 282 aaKnown RBP14.75□□□□□ -0.05
SHMT2-227ENST00000557269 MAP2K5Q13163 448 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 PPP1R18Q6NYC8 613 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 MCF2L2Q86YR7 1114 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 FAM133AQ8N9E0 248 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 RGS22Q8NE09 1264 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 NPLOC4Q8TAT6 608 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 SYTL5Q8TDW5 730 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-227ENST00000557269 INTS4Q96HW7 963 aaKnown RBP14.75□□□□□ -0.05
SHMT2-227ENST00000557269 ZMYND12Q9H0C1 365 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 RIC8AQ9NPQ8 531 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 SH3GLB2Q9NR46 395 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 TMEM260Q9NX78 707 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 SRRDQ9UH36 339 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 SMC3Q9UQE7 1217 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 RBM19Q9Y4C8 960 aaKnown RBP14.75□□□□□ -0.05
SHMT2-227ENST00000557269 TRIM17Q9Y577 477 aa14.75□□□□□ -0.05
SHMT2-227ENST00000557269 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-227ENST00000557269 DDX49Q9Y6V7 483 aaKnown RBP14.75□□□□□ -0.05
SHMT2-227ENST00000557269 ESYT2A0FGR8 921 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 CYP2B6P20813 491 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 ADCY7P51828 1080 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 NLRP5P59047 1200 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 GUCY1B3Q02153 619 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 CCL14Q16627 93 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 ZNF792Q3KQV3 632 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 WASF1Q92558 559 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 TAAR1Q96RJ0 339 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 NUDT12Q9BQG2 462 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 PHF20Q9BVI0 1012 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 FLRT1Q9NZU1 646 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 LCTP09848 1927 aa14.74□□□□□ -0.05
SHMT2-227ENST00000557269 PFASO15067 1338 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 ZNFX1Q9P2E3 1918 aaKnown RBP14.73□□□□□ -0.05
SHMT2-227ENST00000557269 POTEB2H3BUK9 544 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 GCOM1H8Y6P7 765 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-227ENST00000557269 PIK3CDO00329 1044 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 POLR2MP0CAP2 368 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 KRT40Q6A162 431 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 DPP9Q86TI2 863 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 FCHSD1Q86WN1 690 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 FAM184AQ8NB25 1140 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 RASGRP4Q8TDF6 673 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 OXER1Q8TDS5 423 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 SOCS4Q8WXH5 440 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 CUL5Q93034 780 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 BIN2Q9UBW5 565 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-227ENST00000557269 ZNF236Q9UL36 1845 aa14.73□□□□□ -0.05
SHMT2-227ENST00000557269 M0R2N6 131 aa14.72□□□□□ -0.05
SHMT2-227ENST00000557269 GNRH1P01148 92 aa14.72□□□□□ -0.05
SHMT2-227ENST00000557269 HOXC6P09630 235 aa14.72□□□□□ -0.05
SHMT2-227ENST00000557269 RGS2P41220 211 aa14.72□□□□□ -0.05
SHMT2-227ENST00000557269 CLK2P49760 499 aaKnown RBP14.72□□□□□ -0.05
SHMT2-227ENST00000557269 MRPL12P52815 198 aaKnown RBP14.72□□□□□ -0.05
SHMT2-227ENST00000557269 CCDC148Q8NFR7 591 aa14.72□□□□□ -0.05
SHMT2-227ENST00000557269 PGBD1Q96JS3 809 aa14.72□□□□□ -0.05
SHMT2-227ENST00000557269 C8orf76Q96K31 380 aa14.72□□□□□ -0.05
SHMT2-227ENST00000557269 C6orf50Q9HD87 102 aa14.72□□□□□ -0.05
SHMT2-227ENST00000557269 PCDHA4Q9UN74 947 aa14.72□□□□□ -0.05
SHMT2-227ENST00000557269 RBBP6Q7Z6E9 1792 aaKnown RBP14.72□□□□□ -0.05
SHMT2-227ENST00000557269 IGHA2P01877 340 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 HOXD10P28358 340 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 UBXN2AP68543 259 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 BECN1Q14457 450 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 JAKMIP3Q5VZ66 844 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 DAGLBQ8NCG7 672 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 FBXO18Q8NFZ0 1043 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 CCDC12Q8WUD4 166 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-227ENST00000557269 MAML3Q96JK9 1138 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 APBA2Q99767 749 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 MAF1Q9H063 256 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 MAP3K20Q9NYL2 800 aaKnown RBP14.71□□□□□ -0.05
SHMT2-227ENST00000557269 PCDHA6Q9UN73 950 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 PTPN22Q9Y2R2 807 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 PCDHA8Q9Y5H6 950 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 PTCH2Q9Y6C5 1203 aa14.71□□□□□ -0.05
SHMT2-227ENST00000557269 MMP1P03956 469 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 ELNP15502 786 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 XBP1P17861 261 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 GNA11P29992 359 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 IRF5Q13568 498 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 ARHGEF6Q15052 776 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 CTU1Q7Z7A3 348 aaKnown RBP14.7□□□□□ -0.06
SHMT2-227ENST00000557269 BLIDQ8IZY5 108 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 SAMD3Q8N6K7 520 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 IL31RAQ8NI17 732 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 TRIB2Q92519 343 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 TNFRSF25Q93038 417 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 ZFP91Q96JP5 570 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-227ENST00000557269 PRDM10Q9NQV6 1147 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 PXMP2Q9NR77 195 aa14.7□□□□□ -0.06
SHMT2-227ENST00000557269 DIS3Q9Y2L1 958 aaKnown RBP14.7□□□□□ -0.06
SHMT2-227ENST00000557269 RPTORQ8N122 1335 aa14.69□□□□□ -0.06
SHMT2-227ENST00000557269 BTBD18B2RXH4 712 aa14.69□□□□□ -0.06
SHMT2-227ENST00000557269 ADCY3O60266 1144 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms