RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SEPT6Q14141 434 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 CDH24Q86UP0 819 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 AMIGO3Q86WK7 504 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 PDZD8Q8NEN9 1154 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 ABHD4Q8TB40 342 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 RNF141Q8WVD5 230 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 GATAD2BQ8WXI9 593 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 DHX38Q92620 1227 aaKnown RBP5.53□□□□□ -1.52
ATXN3-241ENST00000556374 RUNDC1Q96C34 613 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 ACSF2Q96CM8 615 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-241ENST00000556374 LIN37Q96GY3 246 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-241ENST00000556374 CAMKK2Q96RR4 588 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 ORAI2Q96SN7 254 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 DUSP15Q9H1R2 295 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-241ENST00000556374 MYH16Q9H6N6 1097 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 ZSWIM5Q9P217 1185 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 FMN2Q9NZ56 1722 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 CRYBG1Q9Y4K1 1723 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 KIF20BQ96Q89 1820 aa5.53□□□□□ -1.52
ATXN3-241ENST00000556374 RPGRIP1LQ68CZ1 1315 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 EVC2Q86UK5 1308 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 NFIBO00712 420 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 APAF1O14727 1248 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 GLDCP23378 1020 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 CDK8P49336 464 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 PSMD2Q13200 908 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 SNX17Q15036 470 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 C20orf194Q5TEA3 1177 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 PHC3Q8NDX5 983 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 ENOX1Q8TC92 643 aaKnown RBP5.52□□□□□ -1.53
ATXN3-241ENST00000556374 PPP1R13LQ8WUF5 828 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 MYLIPQ8WY64 445 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 CRELD1Q96HD1 420 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 Q96M66 194 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 ASPNQ9BXN1 380 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 PARP2Q9UGN5 583 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 CCDC9Q9Y3X0 531 aaKnown RBP5.52□□□□□ -1.53
ATXN3-241ENST00000556374 ANKRD36BQ8N2N9 1353 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 ROBO2Q9HCK4 1378 aa5.52□□□□□ -1.53
ATXN3-241ENST00000556374 ADGRF5Q8IZF2 1346 aa5.51□□□□□ -1.53
ATXN3-241ENST00000556374 ADGRB1O14514 1584 aa5.51□□□□□ -1.53
ATXN3-241ENST00000556374 TNS3Q68CZ2 1445 aa5.51□□□□□ -1.53
ATXN3-241ENST00000556374 FAM221AA4D161 298 aa5.51□□□□□ -1.53
ATXN3-241ENST00000556374 BPNT1O95861 308 aa5.51□□□□□ -1.53
ATXN3-241ENST00000556374 XPCQ01831 940 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-241ENST00000556374 SYDE1Q6ZW31 735 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-241ENST00000556374 TTC6Q86TZ1 520 aa5.51□□□□□ -1.53
ATXN3-241ENST00000556374 TSPYL5Q86VY4 417 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-241ENST00000556374 SPPL2CQ8IUH8 684 aa5.51□□□□□ -1.53
ATXN3-241ENST00000556374 FTSJ3Q8IY81 847 aaKnown RBP5.51□□□□□ -1.53
ATXN3-241ENST00000556374 OXR1Q8N573 874 aa5.51□□□□□ -1.53
ATXN3-241ENST00000556374 FRAT1Q92837 279 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-241ENST00000556374 SYTL4Q96C24 671 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-241ENST00000556374 ABCC11Q96J66 1382 aa5.51□□□□□ -1.53
ATXN3-241ENST00000556374 SBF2Q86WG5 1849 aa5.51□□□□□ -1.53
ATXN3-241ENST00000556374 TULP4Q9NRJ4 1543 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 RBM47A0AV96 593 aaKnown RBP5.5□□□□□ -1.53
ATXN3-241ENST00000556374 FITM1A5D6W6 292 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 PLCG1P19174 1290 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 TPP2P29144 1249 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-241ENST00000556374 CHRNEQ04844 493 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 MPP2Q14168 576 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 PRR23BQ6ZRT6 265 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 IRF2BP1Q8IU81 584 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 RELL1Q8IUW5 271 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 DTWD2Q8NBA8 298 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 PNNQ9H307 717 aaKnown RBP5.5□□□□□ -1.53
ATXN3-241ENST00000556374 EPB41L4BQ9H329 900 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 RWDD1Q9H446 243 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-241ENST00000556374 CWC22Q9HCG8 908 aaKnown RBP5.5□□□□□ -1.53
ATXN3-241ENST00000556374 SLAMF8Q9P0V8 285 aa5.5□□□□□ -1.53
ATXN3-241ENST00000556374 RGPD8O14715 1765 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-241ENST00000556374 KNDC1Q76NI1 1749 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 SORBS3O60504 671 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 PEX10O60683 326 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 KRT1P04264 644 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 CT47B1P0C2W7 299 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-241ENST00000556374 TMEM253P0C7T8 217 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 CFPP27918 469 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 CAMK2GQ13555 558 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-241ENST00000556374 MEI1Q5TIA1 1274 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 DNAJC14Q6Y2X3 702 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-241ENST00000556374 C1QL4Q86Z23 238 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 WDR63Q8IWG1 891 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 TRMT2AQ8IZ69 625 aaKnown RBP5.49□□□□□ -1.53
ATXN3-241ENST00000556374 FAM13CQ8NE31 585 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 XAGE3Q8WTP9 111 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 RHOVQ96L33 236 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 CCDC74BQ96LY2 380 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 TMEM74Q96NL1 305 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 PUS7Q96PZ0 661 aaKnown RBP5.49□□□□□ -1.53
ATXN3-241ENST00000556374 SLC6A17Q9H1V8 727 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 DUSP13Q9UII6 198 aa5.49□□□□□ -1.53
ATXN3-241ENST00000556374 SPATA31A3Q5VYP0 1347 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 PEAK1Q9H792 1746 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 TRPM3Q9HCF6 1732 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-241ENST00000556374 TOPAZ1Q8N9V7 1692 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 ALS2Q96Q42 1657 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 EIF5BO60841 1220 aaKnown RBP5.48□□□□□ -1.53
ATXN3-241ENST00000556374 BCAR3O75815 825 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms