RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 KLHL40Q2TBA0 621 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 MCTP2Q6DN12 878 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 FASTKD5Q7L8L6 764 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 TBCKQ8TEA7 893 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 WNK4Q96J92 1243 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 PNMA2Q9UL42 364 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 PCDHA7Q9UN72 937 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 ZNF536O15090 1300 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 MYPNQ86TC9 1320 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 RLFQ13129 1914 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 POTEB2H3BUK9 544 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 GCOM1H8Y6P7 765 aaPredicted RBP11□□□□□ -0.65
HNRNPC-220ENST00000555585 FOSP01100 380 aaPredicted RBP11□□□□□ -0.65
HNRNPC-220ENST00000555585 POLR2MP0CAP2 368 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 OSBPP22059 807 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 TIE1P35590 1138 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 HUNKP57058 714 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
HNRNPC-220ENST00000555585 PABPC4Q13310 644 aaKnown RBP eCLIP11□□□□□ -0.659e-62■□□□□ 10
HNRNPC-220ENST00000555585 AP3B2Q13367 1082 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 PLS1Q14651 629 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 LETM2Q2VYF4 491 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 CST9Q5W186 159 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 NEK8Q86SG6 692 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 CCAR1Q8IX12 1150 aaKnown RBP11□□□□□ -0.65
HNRNPC-220ENST00000555585 HOMER2Q9NSB8 354 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 BMP2KQ9NSY1 1161 aaPredicted RBP11□□□□□ -0.65
HNRNPC-220ENST00000555585 AGTPBP1Q9UPW5 1226 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 SMCHD1A6NHR9 2005 aa11□□□□□ -0.65
HNRNPC-220ENST00000555585 RBBP6Q7Z6E9 1792 aaKnown RBP10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 SPDYE3A6NKU9 549 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 SPDYE16A6NNV3 312 aaPredicted RBP10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 WNT7AO00755 349 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 MEIS2O14770 477 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 OPLAHO14841 1288 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 CCNT1O60563 726 aaKnown RBP10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 CUTAO60888 179 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 HOXA7P31268 230 aaPredicted RBP10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 HOXA13P31271 388 aaPredicted RBP10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 GTF2A2P52657 109 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 OAZ1P54368 228 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 PTGDRQ13258 359 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 ADALQ6DHV7 355 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 SNRNP48Q6IEG0 339 aaKnown RBP10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 CAVIN1Q6NZI2 390 aaKnown RBP10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 FCHSD1Q86WN1 690 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 MCF2L2Q86YR7 1114 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 FSIP1Q8NA03 581 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 TBC1D5Q92609 795 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 TRERF1Q96PN7 1200 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 ANP32EQ9BTT0 268 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 ANO3Q9BYT9 981 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 GZF1Q9H116 711 aaPredicted RBP10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 EHMT1Q9H9B1 1298 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 ADAMTS5Q9UNA0 930 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 TRPC6Q9Y210 931 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
HNRNPC-220ENST00000555585 MYH7BA7E2Y1 1941 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 CETPP11597 493 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 LIG1P18858 919 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 MOGSQ13724 837 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 TMEM132BQ14DG7 1078 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 MUM1L1Q5H9M0 696 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 SPRYD7Q5W111 196 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 GPAT2Q6NUI2 795 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 CCDC73Q6ZRK6 1079 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 TEX2Q8IWB9 1127 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 SMC1BQ8NDV3 1235 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 REPS2Q8NFH8 660 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 MRPS27Q92552 414 aaKnown RBP10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 SYAP1Q96A49 352 aaPredicted RBP10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 CLIC6Q96NY7 704 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 P2RX7Q99572 595 aaKnown RBP10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 NAP1L4Q99733 375 aaKnown RBP10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 PAGR1Q9BTK6 254 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 ASCC2Q9H1I8 757 aaPredicted RBP10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 RNF146Q9NTX7 359 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 FBXO2Q9UK22 296 aaPredicted RBP10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 MRVI1Q9Y6F6 885 aa10.98□□□□□ -0.65
HNRNPC-220ENST00000555585 CCL15-CCL14A0A0B4J2E2 113 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 A0A1W2PQ27 194 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 A0A1W2PQ64 194 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 A0A1W2PQD8 194 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 PIK3CDO00329 1044 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 NFIBO00712 420 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 KIF3CO14782 793 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 ZBTB48P10074 688 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 PTPREP23469 700 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 STAT3P40763 770 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 ZNF157P51786 506 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 HERVK_113P62684 666 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 ATP2C1P98194 919 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 ORC2Q13416 577 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 CCL15Q16663 113 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 TKFCQ3LXA3 575 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 NSMFQ6X4W1 530 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 MB21D1Q8N884 522 aa10.97□□□□□ -0.65
HNRNPC-220ENST00000555585 CLEC4DQ8WXI8 215 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms