RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TTLL6Q8N841 843 aa6.16□□□□□ -1.42
SRP54-207ENST00000555535 LCORQ96JN0 433 aaPredicted RBP6.16□□□□□ -1.42
SRP54-207ENST00000555535 SLC6A18Q96N87 628 aa6.16□□□□□ -1.42
SRP54-207ENST00000555535 PTCHD1Q96NR3 888 aa6.16□□□□□ -1.42
SRP54-207ENST00000555535 EHMT1Q9H9B1 1298 aa6.16□□□□□ -1.42
SRP54-207ENST00000555535 CD248Q9HCU0 757 aa6.16□□□□□ -1.42
SRP54-207ENST00000555535 TCAF1Q9Y4C2 921 aa6.16□□□□□ -1.42
SRP54-207ENST00000555535 WDR33Q9C0J8 1336 aaKnown RBP6.16□□□□□ -1.42
SRP54-207ENST00000555535 NPEPPSL1A6NEC2 478 aa6.15□□□□□ -1.42
SRP54-207ENST00000555535 INHBEP58166 350 aa6.15□□□□□ -1.42
SRP54-207ENST00000555535 FAM160A1Q05DH4 1040 aa6.15□□□□□ -1.42
SRP54-207ENST00000555535 ICAM4Q14773 271 aa6.15□□□□□ -1.42
SRP54-207ENST00000555535 CIR1Q86X95 450 aaPredicted RBP6.15□□□□□ -1.42
SRP54-207ENST00000555535 C7orf61Q8IZ16 206 aa6.15□□□□□ -1.42
SRP54-207ENST00000555535 KYQ8NBH2 561 aa6.15□□□□□ -1.42
SRP54-207ENST00000555535 TESMINQ9Y4I5 508 aa6.15□□□□□ -1.42
SRP54-207ENST00000555535 F6X3S4 739 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 PSMD2Q13200 908 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 ZNF575Q86XF7 245 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 TMEM192Q8IY95 271 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 LZTR1Q8N653 840 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 DNERQ8NFT8 737 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 FBXO27Q8NI29 283 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 DDX11Q96FC9 970 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 ARID3AQ99856 593 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 C11orf84Q9BUA3 381 aaPredicted RBP6.14□□□□□ -1.43
SRP54-207ENST00000555535 BRMS1Q9HCU9 246 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 PPP4R1LQ9P1A2 415 aa6.14□□□□□ -1.43
SRP54-207ENST00000555535 TNFRSF10CO14798 259 aa6.13□□□□□ -1.43
SRP54-207ENST00000555535 MUSKO15146 869 aa6.13□□□□□ -1.43
SRP54-207ENST00000555535 EAPPQ56P03 285 aaPredicted RBP6.13□□□□□ -1.43
SRP54-207ENST00000555535 TXNDC5Q8NBS9 432 aaKnown RBP6.13□□□□□ -1.43
SRP54-207ENST00000555535 SMARCC1Q92922 1105 aaPredicted RBP6.13□□□□□ -1.43
SRP54-207ENST00000555535 LTBP3Q9NS15 1303 aa6.13□□□□□ -1.43
SRP54-207ENST00000555535 NME1P15531 152 aaKnown RBP6.12□□□□□ -1.43
SRP54-207ENST00000555535 DAB2P98082 770 aa6.12□□□□□ -1.43
SRP54-207ENST00000555535 FHL2Q14192 279 aa6.12□□□□□ -1.43
SRP54-207ENST00000555535 NOL9Q5SY16 702 aaKnown RBP6.12□□□□□ -1.43
SRP54-207ENST00000555535 C9orf131Q5VYM1 1079 aa6.12□□□□□ -1.43
SRP54-207ENST00000555535 MCTP2Q6DN12 878 aa6.12□□□□□ -1.43
SRP54-207ENST00000555535 GORASP1Q9BQQ3 440 aa6.12□□□□□ -1.43
SRP54-207ENST00000555535 BCAS3Q9H6U6 928 aa6.12□□□□□ -1.43
SRP54-207ENST00000555535 SF3B6Q9Y3B4 125 aaKnown RBP6.12□□□□□ -1.43
SRP54-207ENST00000555535 H0Y8X5 98 aa6.11□□□□□ -1.43
SRP54-207ENST00000555535 TLR3O15455 904 aaKnown RBP6.11□□□□□ -1.43
SRP54-207ENST00000555535 GARTP22102 1010 aa6.11□□□□□ -1.43
SRP54-207ENST00000555535 ANKRD39Q53RE8 183 aa6.11□□□□□ -1.43
SRP54-207ENST00000555535 PALM2Q8IXS6 379 aa6.11□□□□□ -1.43
SRP54-207ENST00000555535 CCDC144CPQ8IYA2 1237 aa6.11□□□□□ -1.43
SRP54-207ENST00000555535 REXO1Q8N1G1 1221 aaKnown RBP6.11□□□□□ -1.43
SRP54-207ENST00000555535 KCNQ5Q9NR82 932 aa6.11□□□□□ -1.43
SRP54-207ENST00000555535 SUCOQ9UBS9 1254 aaKnown RBP6.11□□□□□ -1.43
SRP54-207ENST00000555535 ING1Q9UK53 422 aaPredicted RBP6.11□□□□□ -1.43
SRP54-207ENST00000555535 SUPT16HQ9Y5B9 1047 aaKnown RBP6.11□□□□□ -1.43
SRP54-207ENST00000555535 FHOD1Q9Y613 1164 aa6.11□□□□□ -1.43
SRP54-207ENST00000555535 MEIS3P2A8K0S8 358 aa6.1□□□□□ -1.43
SRP54-207ENST00000555535 MINDY4BA8MYZ0 360 aa6.1□□□□□ -1.43
SRP54-207ENST00000555535 B4GALT3O60512 393 aa6.1□□□□□ -1.43
SRP54-207ENST00000555535 POU4F1Q01851 419 aa6.1□□□□□ -1.43
SRP54-207ENST00000555535 EEF1DP3Q658K8 133 aa6.1□□□□□ -1.43
SRP54-207ENST00000555535 ZNF585AQ6P3V2 769 aa6.1□□□□□ -1.43
SRP54-207ENST00000555535 ZC3H18Q86VM9 953 aaKnown RBP6.1□□□□□ -1.43
SRP54-207ENST00000555535 FCRL3Q96P31 734 aaPredicted RBP6.1□□□□□ -1.43
SRP54-207ENST00000555535 ZNF341Q9BYN7 854 aa6.1□□□□□ -1.43
SRP54-207ENST00000555535 PARP2Q9UGN5 583 aa6.1□□□□□ -1.43
SRP54-207ENST00000555535 C8BP07358 591 aa6.09□□□□□ -1.43
SRP54-207ENST00000555535 CTSHP09668 335 aa6.09□□□□□ -1.43
SRP54-207ENST00000555535 TGM1P22735 817 aa6.09□□□□□ -1.43
SRP54-207ENST00000555535 ITGAEP38570 1179 aa6.09□□□□□ -1.43
SRP54-207ENST00000555535 EPHB4P54760 987 aa6.09□□□□□ -1.43
SRP54-207ENST00000555535 R3HDM1Q15032 1099 aaKnown RBP6.09□□□□□ -1.43
SRP54-207ENST00000555535 ETV3LQ6ZN32 361 aa6.09□□□□□ -1.43
SRP54-207ENST00000555535 RXFP1Q9HBX9 757 aa6.09□□□□□ -1.43
SRP54-207ENST00000555535 SUPT5HO00267 1087 aaKnown RBP6.08□□□□□ -1.44
SRP54-207ENST00000555535 SHOXO15266 292 aa6.08□□□□□ -1.44
SRP54-207ENST00000555535 GPR42O15529 346 aa6.08□□□□□ -1.44
SRP54-207ENST00000555535 PRR31Q5SQ13 230 aa6.08□□□□□ -1.44
SRP54-207ENST00000555535 INTS3Q68E01 1043 aaKnown RBP6.08□□□□□ -1.44
SRP54-207ENST00000555535 WWC2Q6AWC2 1192 aa6.08□□□□□ -1.44
SRP54-207ENST00000555535 RCSD1Q6JBY9 416 aa6.08□□□□□ -1.44
SRP54-207ENST00000555535 NGRNQ9NPE2 291 aaKnown RBP6.08□□□□□ -1.44
SRP54-207ENST00000555535 RNF19AQ9NV58 838 aa6.08□□□□□ -1.44
SRP54-207ENST00000555535 PATE3B3GLJ2 98 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 DDX3XO00571 662 aaKnown RBP eCLIP6.07□□□□□ -1.441e-8■□□□□ 10.6
SRP54-207ENST00000555535 ACRP10323 421 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 PPP2CBP62714 309 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 PPP2CAP67775 309 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 XPCQ01831 940 aaPredicted RBP6.07□□□□□ -1.44
SRP54-207ENST00000555535 ABHD18Q0P651 414 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 HS1BP3Q53T59 392 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 SPDYAQ5MJ70 313 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 SLFN13Q68D06 897 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 ARHGEF18Q6ZSZ5 1173 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 TMC4Q7Z404 712 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 AMER2Q8N7J2 671 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 IGDCC4Q8TDY8 1250 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 JADE2Q9NQC1 790 aa6.07□□□□□ -1.44
SRP54-207ENST00000555535 GREM1O60565 184 aa6.06□□□□□ -1.44
SRP54-207ENST00000555535 CYP1A1P04798 512 aaPredicted RBP6.06□□□□□ -1.44
SRP54-207ENST00000555535 CD3EP07766 207 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms