RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TNPO1Q92973 898 aaKnown RBP7.12□□□□□ -1.27
VPS33B-203ENST00000554264 NAP1L5Q96NT1 182 aaPredicted RBP7.12□□□□□ -1.27
VPS33B-203ENST00000554264 WDR18Q9BV38 432 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 RRAGDQ9NQL2 400 aaPredicted RBP7.12□□□□□ -1.27
VPS33B-203ENST00000554264 HACL1Q9UJ83 578 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 DLG5Q8TDM6 1919 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 FER1L6Q2WGJ9 1857 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 CCDC88AQ3V6T2 1871 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 SCN4AP35499 1836 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 WDR33Q9C0J8 1336 aaKnown RBP7.11□□□□□ -1.27
VPS33B-203ENST00000554264 U2SURPO15042 1029 aaKnown RBP7.11□□□□□ -1.27
VPS33B-203ENST00000554264 DYRK3O43781 588 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
VPS33B-203ENST00000554264 AOC2O75106 756 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 REC8O95072 547 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 IL6STP40189 918 aaPredicted RBP7.11□□□□□ -1.27
VPS33B-203ENST00000554264 SOX4Q06945 474 aaPredicted RBP7.11□□□□□ -1.27
VPS33B-203ENST00000554264 HSP90AA2PQ14568 343 aaPredicted RBP7.11□□□□□ -1.27
VPS33B-203ENST00000554264 ANKRD34AQ69YU3 496 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 ZSCAN30Q86W11 494 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 RPAP2Q8IXW5 612 aaPredicted RBP7.11□□□□□ -1.27
VPS33B-203ENST00000554264 RTKN2Q8IZC4 609 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 C2CD4AQ8NCU7 369 aaPredicted RBP7.11□□□□□ -1.27
VPS33B-203ENST00000554264 CEP41Q9BYV8 373 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 CEP44Q9C0F1 390 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 SEMA6BQ9H3T3 888 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 CACNA2D2Q9NY47 1150 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 PPP1R9AQ9ULJ8 1098 aa7.11□□□□□ -1.27
VPS33B-203ENST00000554264 TTF2Q9UNY4 1162 aaKnown RBP7.11□□□□□ -1.27
VPS33B-203ENST00000554264 PTPRCP08575 1304 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 CCDC85CA6NKD9 419 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 SORBS3O60504 671 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 MBD3O95983 291 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 H2AFB1P0C5Y9 115 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 H2AFB2P0C5Z0 115 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 MSNP26038 577 aaKnown RBP7.1□□□□□ -1.27
VPS33B-203ENST00000554264 EPHX2P34913 555 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 ECE1P42892 770 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 NASPP49321 788 aaPredicted RBP7.1□□□□□ -1.27
VPS33B-203ENST00000554264 RGS19P49795 217 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 MRPL58Q14197 206 aaKnown RBP7.1□□□□□ -1.27
VPS33B-203ENST00000554264 MTHFSDQ2M296 383 aaKnown RBP7.1□□□□□ -1.27
VPS33B-203ENST00000554264 LDLRAD1Q5T700 205 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 FDX2Q6P4F2 183 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 PRR23CQ6ZRP0 262 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 CNTROBQ8N137 903 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 KCNB2Q92953 911 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 TSR2Q969E8 191 aaKnown RBP7.1□□□□□ -1.27
VPS33B-203ENST00000554264 SYAP1Q96A49 352 aaPredicted RBP7.1□□□□□ -1.27
VPS33B-203ENST00000554264 MYRFLQ96LU7 910 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 CYP4F12Q9HCS2 524 aa7.1□□□□□ -1.27
VPS33B-203ENST00000554264 ABT1Q9ULW3 272 aaKnown RBP7.1□□□□□ -1.27
VPS33B-203ENST00000554264 COL11A2P13942 1736 aaPredicted RBP7.1□□□□□ -1.27
VPS33B-203ENST00000554264 SCN7AQ01118 1682 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 HEG1Q9ULI3 1381 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 ANKRD31Q8N7Z5 1873 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 ZNF541Q9H0D2 1346 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 RBM47A0AV96 593 aaKnown RBP7.09□□□□□ -1.27
VPS33B-203ENST00000554264 ADAM23O75077 832 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 HMMRO75330 724 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 CAMTA2O94983 1202 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 HMOX1P09601 288 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 ZNF853P0CG23 659 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 ADH5P11766 374 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 NPR1P16066 1061 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 PTPN11Q06124 597 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-203ENST00000554264 TEFQ10587 303 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 TAF1CQ15572 869 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-203ENST00000554264 MAP1SQ66K74 1059 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-203ENST00000554264 CDPF1Q6NVV7 123 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 ZNF790Q6PG37 636 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 CLEC4GQ6UXB4 293 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-203ENST00000554264 SV2BQ7L1I2 683 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 NBPF5PQ86XG9 351 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-203ENST00000554264 FAM20CQ8IXL6 584 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 GPC2Q8N158 579 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 UTP4Q969X6 686 aaKnown RBP7.09□□□□□ -1.27
VPS33B-203ENST00000554264 ZNF496Q96IT1 587 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-203ENST00000554264 FMNL2Q96PY5 1086 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 PDCL3Q9H2J4 239 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 ZNF277Q9NRM2 450 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-203ENST00000554264 PCDHGC5Q9Y5F6 944 aa7.09□□□□□ -1.27
VPS33B-203ENST00000554264 UBR2Q8IWV8 1755 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 ADAMTSL1Q8N6G6 1762 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 KLRG2A4D1S0 409 aaPredicted RBP7.08□□□□□ -1.28
VPS33B-203ENST00000554264 FZD9O00144 591 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 VAMP4O75379 141 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 OFD1O75665 1012 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 BMP3P12645 472 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 MCCP23508 829 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 IARSP41252 1262 aaKnown RBP7.08□□□□□ -1.28
VPS33B-203ENST00000554264 KIF4BQ2VIQ3 1234 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 SGO2Q562F6 1265 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 ANKRD45Q5TZF3 282 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 PCNX4Q63HM2 1172 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 GPBAR1Q8TDU6 330 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 JDP2Q8WYK2 163 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 CAPNS2Q96L46 248 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 LNPKQ9C0E8 428 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms