RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 TKFCQ3LXA3 575 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 TTC38Q5R3I4 469 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 ANKRD23Q86SG2 305 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 MCF2L2Q86YR7 1114 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 LINC00301Q8NCQ3 95 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 CLEC4DQ8WXI8 215 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 TEX13BQ9BXU2 312 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 ABT1Q9ULW3 272 aaKnown RBP13.42□□□□□ -0.26
NEK9-202ENST00000553823 PCDHB6Q9Y5E3 794 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 SPDYE3A6NKU9 549 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 BTBD19C9JJ37 291 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 PDHXO00330 501 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 CFBP00751 764 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 SLC10A3P09131 477 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 HOXA13P31271 388 aaPredicted RBP13.41□□□□□ -0.26
NEK9-202ENST00000553823 STAT3P40763 770 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 NBR1Q14596 966 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 PLS1Q14651 629 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 SLC39A14Q15043 492 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 PTPAQ15257 358 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 SNRNP48Q6IEG0 339 aaKnown RBP13.41□□□□□ -0.26
NEK9-202ENST00000553823 NEK8Q86SG6 692 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 SAMD3Q8N6K7 520 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 KCNG4Q8TDN1 519 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 TBCKQ8TEA7 893 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 GTF3C2Q8WUA4 911 aaPredicted RBP13.41□□□□□ -0.26
NEK9-202ENST00000553823 HHIPL1Q96JK4 782 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 PGBD1Q96JS3 809 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 TRERF1Q96PN7 1200 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 ANO3Q9BYT9 981 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.41□□□□□ -0.26
NEK9-202ENST00000553823 HOMER2Q9NSB8 354 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 RNF146Q9NTX7 359 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 CEP131Q9UPN4 1083 aa13.41□□□□□ -0.26
NEK9-202ENST00000553823 TESPA1A2RU30 521 aaPredicted RBP13.4□□□□□ -0.26
NEK9-202ENST00000553823 MANSC4A6NHS7 340 aaPredicted RBP13.4□□□□□ -0.26
NEK9-202ENST00000553823 NFIBO00712 420 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 WNT7AO00755 349 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 SPTLC2O15270 562 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 BMP15O95972 392 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 GHRHRQ02643 423 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 MUM1L1Q5H9M0 696 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 TBC1D5Q92609 795 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 CCDC102AQ96A19 550 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 MAP3K20Q9NYL2 800 aaKnown RBP13.4□□□□□ -0.26
NEK9-202ENST00000553823 BTBD7Q9P203 1132 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 RABGAP1Q9Y3P9 1069 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 RIPK3Q9Y572 518 aa13.4□□□□□ -0.26
NEK9-202ENST00000553823 PPP6R2O75170 966 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 GADD45BO75293 160 aaPredicted RBP13.39□□□□□ -0.27
NEK9-202ENST00000553823 HSD17B4P51659 736 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 UBE2HP62256 183 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 ZNF174Q15697 407 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 FCHSD1Q86WN1 690 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 RIOX2Q8IUF8 465 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 FAM43AQ8N2R8 423 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 JMYQ8N9B5 988 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 CHST13Q8NET6 341 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 PAGR1Q9BTK6 254 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 MAF1Q9H063 256 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 SPATC1LQ9H0A9 340 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 ACAD9Q9H845 621 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 EHMT1Q9H9B1 1298 aa13.39□□□□□ -0.27
NEK9-202ENST00000553823 MORC2Q9Y6X9 1032 aaPredicted RBP13.39□□□□□ -0.27
NEK9-202ENST00000553823 GOLGA6L4A6NEF3 574 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 FAM155AB1AL88 458 aaPredicted RBP13.38□□□□□ -0.27
NEK9-202ENST00000553823 CNMDO75829 334 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 CYP2C8P10632 490 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 MARCKSP29966 332 aaPredicted RBP13.38□□□□□ -0.27
NEK9-202ENST00000553823 MCM7P33993 719 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 COPB2P35606 906 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 SREBF1P36956 1147 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 ME1P48163 572 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 USP11P51784 963 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 ORC2Q13416 577 aaPredicted RBP13.38□□□□□ -0.27
NEK9-202ENST00000553823 SKOR2Q2VWA4 1001 aaPredicted RBP13.38□□□□□ -0.27
NEK9-202ENST00000553823 LETM2Q2VYF4 491 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 RNF207Q6ZRF8 634 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 SMCR8Q8TEV9 937 aaPredicted RBP13.38□□□□□ -0.27
NEK9-202ENST00000553823 PARK7Q99497 189 aaKnown RBP13.38□□□□□ -0.27
NEK9-202ENST00000553823 NAP1L4Q99733 375 aaKnown RBP13.38□□□□□ -0.27
NEK9-202ENST00000553823 PTPN18Q99952 460 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 ZCCHC17Q9NP64 241 aaKnown RBP13.38□□□□□ -0.27
NEK9-202ENST00000553823 RBPJLQ9UBG7 517 aa13.38□□□□□ -0.27
NEK9-202ENST00000553823 ZNFX1Q9P2E3 1918 aaKnown RBP13.38□□□□□ -0.27
NEK9-202ENST00000553823 EDIL3O43854 480 aa13.37□□□□□ -0.27
NEK9-202ENST00000553823 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
NEK9-202ENST00000553823 PEX10O60683 326 aa13.37□□□□□ -0.27
NEK9-202ENST00000553823 SLC25A27O95847 323 aa13.37□□□□□ -0.27
NEK9-202ENST00000553823 GCLCP48506 637 aaPredicted RBP13.37□□□□□ -0.27
NEK9-202ENST00000553823 INHBEP58166 350 aa13.37□□□□□ -0.27
NEK9-202ENST00000553823 RPS6P62753 249 aaKnown RBP13.37□□□□□ -0.27
NEK9-202ENST00000553823 ARHGAP4P98171 946 aa13.37□□□□□ -0.27
NEK9-202ENST00000553823 ATP2C1P98194 919 aaPredicted RBP13.37□□□□□ -0.27
NEK9-202ENST00000553823 PTGDRQ13258 359 aa13.37□□□□□ -0.27
NEK9-202ENST00000553823 NSMFQ6X4W1 530 aa13.37□□□□□ -0.27
NEK9-202ENST00000553823 SYTL5Q8TDW5 730 aaPredicted RBP13.37□□□□□ -0.27
NEK9-202ENST00000553823 MOV10L1Q9BXT6 1211 aaKnown RBP13.37□□□□□ -0.27
NEK9-202ENST00000553823 TXNRD2Q9NNW7 524 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms