RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PLEKHD1A6NEE1 506 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 GOLGA6L4A6NEF3 574 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 C5orf60A6NFR6 353 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 GOLGA8KD6RF30 607 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 CHL1O00533 1208 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 DNAJC8O75937 253 aaPredicted RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 PDGFAP04085 211 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 SLURP2P0DP57 97 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 GHRP10912 638 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 ALADP13716 330 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 FERP16591 822 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF18P17022 549 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 SLC8A1P32418 973 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 PIP4K2BP78356 416 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 CCT2P78371 535 aaKnown RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 LMNB2Q03252 620 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 SRSF11Q05519 484 aaKnown RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 SPEM2Q0P670 501 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 G3BP1Q13283 466 aaKnown RBP eCLIP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 OS9Q13438 667 aaPredicted RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 STIM1Q13586 685 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 GNL2Q13823 731 aaKnown RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 BLMHQ13867 455 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 TOB2Q14106 344 aaPredicted RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 KCNB1Q14721 858 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 DPCR1Q3MIW9 517 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 HSP90AB2PQ58FF8 381 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 CMPK2Q5EBM0 449 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 CYB5D1Q6P9G0 228 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 KDM7AQ6ZMT4 941 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF662Q6ZS27 426 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 MICALCLQ6ZW33 695 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 BZW1Q7L1Q6 419 aaKnown RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 RASGRP2Q7LDG7 609 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF572Q7Z3I7 529 aaPredicted RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 CCDC13Q8IYE1 715 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 CCDC170Q8IYT3 715 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF513Q8N8E2 541 aaPredicted RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 NECAB1Q8N987 351 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 NOA1Q8NC60 698 aaKnown RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 BCAS4Q8TDM0 211 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 GPR152Q8TDT2 470 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 P3H4Q92791 437 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 EZH1Q92800 747 aaPredicted RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 PANX2Q96RD6 677 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 MDFIQ99750 246 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 LLPHQ9BRT6 129 aaKnown RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 C11orf16Q9NQ32 467 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 CCDC87Q9NVE4 849 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 RTEL1Q9NZ71 1219 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 CPSF2Q9P2I0 782 aaKnown RBP5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 ANAPC4Q9UJX5 808 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 BLOC1S6Q9UL45 172 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 ATP7AQ04656 1500 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 CTAGE15A4D2H0 777 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 SPDYE3A6NKU9 549 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 ABLIM1O14639 778 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 RAB11FIP3O75154 756 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 ADAMTS2O95450 1211 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 IGHA2P01877 340 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 LINGO3P0C6S8 592 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 CTAGE8P0CG41 777 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 BMP4P12644 408 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 CPA1P15085 419 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 EZRP15311 586 aaKnown RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 EPB42P16452 691 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 MZF1P28698 734 aaPredicted RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 TNFRSF8P28908 595 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 PBX1P40424 430 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 CCT4P50991 539 aaKnown RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 GNGT1P63211 74 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 ROR2Q01974 943 aaKnown RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 PTH1RQ03431 593 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 SNX1Q13596 522 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 ANKRD1Q15327 319 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF468Q5VIY5 522 aaPredicted RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 NAA35Q5VZE5 725 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 ALS2CLQ60I27 953 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 ADALQ6DHV7 355 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 ALKBH2Q6NS38 261 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 PRPF40BQ6NWY9 871 aaKnown RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 DNAJC14Q6Y2X3 702 aaPredicted RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 TRAPPC11Q7Z392 1133 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 CTAGE6Q86UF2 777 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 FERMT3Q86UX7 667 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 CD302Q8IX05 232 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 CTAGE4Q8IX94 777 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 TRIM58Q8NG06 486 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 SSH3Q8TE77 659 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 MAP4K1Q92918 833 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 CCDC47Q96A33 483 aaKnown RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 NUDT16Q96DE0 195 aaKnown RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 PHACTR3Q96KR7 559 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 ANKRD27Q96NW4 1050 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 PLEKHG4BQ96PX9 1271 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 NAA15Q9BXJ9 866 aaKnown RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 GSX2Q9BZM3 304 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 EPN3Q9H201 632 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms