RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 HOXC6P09630 235 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 CYP2B6P20813 491 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 NAPAP54920 295 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 RPS6P62753 249 aaKnown RBP15.03■□□□□ -0
RAB5C-206ENST00000550406 TRAF1Q13077 416 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 KCTD2Q14681 263 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 RNF207Q6ZRF8 634 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 CTU1Q7Z7A3 348 aaKnown RBP15.03■□□□□ -0
RAB5C-206ENST00000550406 ZNF713Q8N859 430 aaPredicted RBP15.03■□□□□ -0
RAB5C-206ENST00000550406 CWC22Q9HCG8 908 aaKnown RBP15.03■□□□□ -0
RAB5C-206ENST00000550406 FLRT1Q9NZU1 646 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 PTPN22Q9Y2R2 807 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 LRRC37A2A6NM11 1700 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 SMCO2A6NFE2 343 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 CFBP00751 764 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 HOXD10P28358 340 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 HOXA13P31271 388 aaPredicted RBP15.02■□□□□ -0
RAB5C-206ENST00000550406 ARHGEF6Q15052 776 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 NPY5RQ15761 445 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 CCL14Q16627 93 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 USP17L6PQ6QN14 398 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 MCF2L2Q86YR7 1114 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 SYTL5Q8TDW5 730 aaPredicted RBP15.02■□□□□ -0
RAB5C-206ENST00000550406 TAAR1Q96RJ0 339 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 ALG1Q9BT22 464 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 MAF1Q9H063 256 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 ZMYND12Q9H0C1 365 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 RIC8AQ9NPQ8 531 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 SH3GLB2Q9NR46 395 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 PTCH2Q9Y6C5 1203 aa15.02■□□□□ -0
RAB5C-206ENST00000550406 MYH7BA7E2Y1 1941 aa15.02□□□□□ -0.01
RAB5C-206ENST00000550406 PFASO15067 1338 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 ESYT2A0FGR8 921 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 CALML3P27482 149 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 RGS2P41220 211 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 IRF5Q13568 498 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 UBE2SQ16763 222 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 PPP1R18Q6NYC8 613 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 DPP9Q86TI2 863 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 SAMD3Q8N6K7 520 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 SOCS4Q8WXH5 440 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 PSTPIP2Q9H939 334 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 KCNJ14Q9UNX9 436 aa15.01□□□□□ -0.01
RAB5C-206ENST00000550406 DIS3Q9Y2L1 958 aaKnown RBP15.01□□□□□ -0.01
RAB5C-206ENST00000550406 DDX49Q9Y6V7 483 aaKnown RBP15.01□□□□□ -0.01
RAB5C-206ENST00000550406 POTEB2H3BUK9 544 aa15□□□□□ -0.01
RAB5C-206ENST00000550406 GCOM1H8Y6P7 765 aaPredicted RBP15□□□□□ -0.01
RAB5C-206ENST00000550406 PIK3CDO00329 1044 aa15□□□□□ -0.01
RAB5C-206ENST00000550406 POLR2MP0CAP2 368 aa15□□□□□ -0.01
RAB5C-206ENST00000550406 XRCC5P13010 732 aaKnown RBP15□□□□□ -0.01
RAB5C-206ENST00000550406 CLK2P49760 499 aaKnown RBP15□□□□□ -0.01
RAB5C-206ENST00000550406 PRMT2P55345 433 aa15□□□□□ -0.01
RAB5C-206ENST00000550406 HMGN5P82970 282 aaKnown RBP15□□□□□ -0.01
RAB5C-206ENST00000550406 HSCBQ8IWL3 235 aa15□□□□□ -0.01
RAB5C-206ENST00000550406 MAML3Q96JK9 1138 aa15□□□□□ -0.01
RAB5C-206ENST00000550406 APBA2Q99767 749 aa15□□□□□ -0.01
RAB5C-206ENST00000550406 PHF20Q9BVI0 1012 aa15□□□□□ -0.01
RAB5C-206ENST00000550406 MAP3K20Q9NYL2 800 aaKnown RBP15□□□□□ -0.01
RAB5C-206ENST00000550406 KIAA1217Q5T5P2 1943 aa15□□□□□ -0.01
RAB5C-206ENST00000550406 M0R2N6 131 aa14.99□□□□□ -0.01
RAB5C-206ENST00000550406 ADCY3O60266 1144 aa14.99□□□□□ -0.01
RAB5C-206ENST00000550406 ELNP15502 786 aa14.99□□□□□ -0.01
RAB5C-206ENST00000550406 GJB2P29033 226 aa14.99□□□□□ -0.01
RAB5C-206ENST00000550406 FOSBP53539 338 aa14.99□□□□□ -0.01
RAB5C-206ENST00000550406 TRIM32Q13049 653 aa14.99□□□□□ -0.01
RAB5C-206ENST00000550406 TRIB2Q92519 343 aa14.99□□□□□ -0.01
RAB5C-206ENST00000550406 CUL5Q93034 780 aa14.99□□□□□ -0.01
RAB5C-206ENST00000550406 INTS4Q96HW7 963 aaKnown RBP14.99□□□□□ -0.01
RAB5C-206ENST00000550406 FOXD4L1Q9NU39 408 aa14.99□□□□□ -0.01
RAB5C-206ENST00000550406 TMEM260Q9NX78 707 aa14.99□□□□□ -0.01
RAB5C-206ENST00000550406 ALDH5A1P51649 535 aaPredicted RBP14.98□□□□□ -0.01
RAB5C-206ENST00000550406 ADCY7P51828 1080 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 MRPL12P52815 198 aaKnown RBP14.98□□□□□ -0.01
RAB5C-206ENST00000550406 KRT40Q6A162 431 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 MAMDC4Q6UXC1 1216 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 ZNF467Q7Z7K2 595 aaPredicted RBP14.98□□□□□ -0.01
RAB5C-206ENST00000550406 FCHSD1Q86WN1 690 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 RAET1EQ8TD07 263 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 RASGRP4Q8TDF6 673 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 OXER1Q8TDS5 423 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 WASF1Q92558 559 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 C6orf50Q9HD87 102 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 BIN2Q9UBW5 565 aaPredicted RBP14.98□□□□□ -0.01
RAB5C-206ENST00000550406 SMC3Q9UQE7 1217 aa14.98□□□□□ -0.01
RAB5C-206ENST00000550406 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.98□□□□□ -0.01
RAB5C-206ENST00000550406 RPTORQ8N122 1335 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 SNAI1O95863 264 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-206ENST00000550406 NLRP5P59047 1200 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 GUCY1B3Q02153 619 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 OLFML2BQ68BL8 750 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 FBXO46Q6PJ61 603 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-206ENST00000550406 FAM177A1Q8N128 213 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-206ENST00000550406 DAGLBQ8NCG7 672 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 MORC4Q8TE76 937 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 PXYLP1Q8TE99 480 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 CCDC12Q8WUD4 166 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-206ENST00000550406 PGBD1Q96JS3 809 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 PXMP2Q9NR77 195 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms