RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TAL1P17542 331 aaPredicted RBP9.07□□□□□ -0.96
NEK3-201ENST00000550331 PLA2G5P39877 138 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 TLE2Q04725 743 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 PDE4BQ07343 736 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 FOXC1Q12948 553 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 GRIN2CQ14957 1233 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 SWT1Q5T5J6 900 aaKnown RBP9.07□□□□□ -0.96
NEK3-201ENST00000550331 NUDT18Q6ZVK8 323 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 SH3RF1Q7Z6J0 888 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 IFNL3Q8IZI9 196 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 STK11IPQ8N1F8 1099 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 PI4K2BQ8TCG2 481 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 FERMT2Q96AC1 680 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 TRIM43Q96BQ3 446 aaPredicted RBP9.07□□□□□ -0.96
NEK3-201ENST00000550331 FAM122AQ96E09 287 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 DDX11Q96FC9 970 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 CEP95Q96GE4 821 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 TSEN34Q9BSV6 310 aaKnown RBP9.07□□□□□ -0.96
NEK3-201ENST00000550331 SLC38A10Q9HBR0 1119 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 TOR4AQ9NXH8 423 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 FBXO40Q9UH90 709 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 FEM1BQ9UK73 627 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 RIPK3Q9Y572 518 aa9.07□□□□□ -0.96
NEK3-201ENST00000550331 BDP1A6H8Y1 2624 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 PARP14Q460N5 1801 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 A0A1W2PQ45 241 aaPredicted RBP9.06□□□□□ -0.96
NEK3-201ENST00000550331 A0A1W2PQY0 241 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 MOXD2PA6NHM9 499 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 DPYSL4O14531 572 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 KIAA0355O15063 1070 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 PRDM1O75626 825 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 SNAI1O95863 264 aaPredicted RBP9.06□□□□□ -0.96
NEK3-201ENST00000550331 PGK1P00558 417 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 TSPY3P0CV98 308 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 TSPY8P0CW00 308 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 BMP3P12645 472 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 LORP23490 312 aaPredicted RBP9.06□□□□□ -0.96
NEK3-201ENST00000550331 ANKRD33Q7Z3H0 272 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 CPXCR1Q8N123 301 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 CHST13Q8NET6 341 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 NEDD1Q8NHV4 660 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 NUP133Q8WUM0 1156 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 PPM1EQ8WY54 764 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 KIFC2Q96AC6 838 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 TOX2Q96NM4 488 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 NAPBQ9H115 298 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 FAM184BQ9ULE4 1060 aa9.06□□□□□ -0.96
NEK3-201ENST00000550331 CTDP1Q9Y5B0 961 aaPredicted RBP9.06□□□□□ -0.96
NEK3-201ENST00000550331 TCF20Q9UGU0 1960 aaKnown RBP9.06□□□□□ -0.96
NEK3-201ENST00000550331 SYNRGQ9UMZ2 1314 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 DUSP11O75319 330 aaKnown RBP9.05□□□□□ -0.96
NEK3-201ENST00000550331 DNAJB2P25686 324 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 CST5P28325 142 aaPredicted RBP9.05□□□□□ -0.96
NEK3-201ENST00000550331 STAT2P52630 851 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 ACLYP53396 1101 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 EPHB4P54760 987 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 PPARAQ07869 468 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 CAMK2BQ13554 666 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 ZMYM1Q5SVZ6 1142 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 SLFN13Q68D06 897 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 CCSAPQ6IQ19 270 aaPredicted RBP9.05□□□□□ -0.96
NEK3-201ENST00000550331 FAM160B2Q86V87 743 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 LRRC47Q8N1G4 583 aaKnown RBP9.05□□□□□ -0.96
NEK3-201ENST00000550331 ANKRD35Q8N283 1001 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 KLHDC9Q8NEP7 349 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 LENG1Q96BZ8 264 aaPredicted RBP9.05□□□□□ -0.96
NEK3-201ENST00000550331 GMCL1Q96IK5 515 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 SEC62Q99442 399 aaKnown RBP9.05□□□□□ -0.96
NEK3-201ENST00000550331 FSD1Q9BTV5 496 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 ABHD16BQ9H3Z7 469 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 RAVER2Q9HCJ3 691 aaKnown RBP9.05□□□□□ -0.96
NEK3-201ENST00000550331 STARD7Q9NQZ5 370 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 ZHX1Q9UKY1 873 aaPredicted RBP9.05□□□□□ -0.96
NEK3-201ENST00000550331 MYH8P13535 1937 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 BAZ2AQ9UIF9 1905 aaKnown RBP9.05□□□□□ -0.96
NEK3-201ENST00000550331 MROH7Q68CQ1 1323 aa9.05□□□□□ -0.96
NEK3-201ENST00000550331 MYH7P12883 1935 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.04□□□□□ -0.96
NEK3-201ENST00000550331 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.04□□□□□ -0.96
NEK3-201ENST00000550331 DCDC2CA8MYV0 355 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 PLA2G6O60733 806 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 PQBP1O60828 265 aaKnown RBP9.04□□□□□ -0.96
NEK3-201ENST00000550331 RAG1P15918 1043 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 MX1P20591 662 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 ITGB8P26012 769 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 TFAP4Q01664 338 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 FPGSQ05932 587 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 ACVR2BQ13705 512 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 PCSK9Q8NBP7 692 aaKnown RBP9.04□□□□□ -0.96
NEK3-201ENST00000550331 OTUD7AQ8TE49 926 aaPredicted RBP9.04□□□□□ -0.96
NEK3-201ENST00000550331 ADAMTS19Q8TE59 1207 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 CHURC1Q8WUH1 139 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 STAG1Q8WVM7 1258 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 ATXN2LQ8WWM7 1075 aaKnown RBP9.04□□□□□ -0.96
NEK3-201ENST00000550331 FGD4Q96M96 766 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 GLT1D1Q96MS3 346 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 GAS2L1Q99501 681 aaPredicted RBP9.04□□□□□ -0.96
NEK3-201ENST00000550331 ZNF576Q9H609 170 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 ACAD9Q9H845 621 aa9.04□□□□□ -0.96
NEK3-201ENST00000550331 SPC25Q9HBM1 224 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms