RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 ASCC2Q9H1I8 757 aaPredicted RBP6.11□□□□□ -1.43
SNRPF-202ENST00000549580 ANTXR1Q9H6X2 564 aa6.11□□□□□ -1.43
SNRPF-202ENST00000549580 A0A1W2PQH9 124 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 SSU72P8A0A1W2PR75 194 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 ABLIM1O14639 778 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 MPOP05164 745 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 RUFY4Q6ZNE9 571 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 LILRB2Q8N423 598 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 DAGLBQ8NCG7 672 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 MICAL1Q8TDZ2 1067 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 ST7Q9NRC1 585 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 SMPD4Q9NXE4 827 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 PLA2G2DQ9UNK4 145 aa6.1□□□□□ -1.43
SNRPF-202ENST00000549580 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.1□□□□□ -1.43
SNRPF-202ENST00000549580 GPR55Q9Y2T6 319 aaPredicted RBP6.1□□□□□ -1.43
SNRPF-202ENST00000549580 FADS2P1A8MWK0 482 aa6.09□□□□□ -1.43
SNRPF-202ENST00000549580 PDPK1O15530 556 aa6.09□□□□□ -1.43
SNRPF-202ENST00000549580 PRKCAP17252 672 aa6.09□□□□□ -1.43
SNRPF-202ENST00000549580 GUCY2CP25092 1073 aa6.09□□□□□ -1.43
SNRPF-202ENST00000549580 GBP1P32455 592 aa6.09□□□□□ -1.43
SNRPF-202ENST00000549580 CEBPAP49715 358 aaPredicted RBP6.09□□□□□ -1.43
SNRPF-202ENST00000549580 PCBP3P57721 371 aaKnown RBP6.09□□□□□ -1.43
SNRPF-202ENST00000549580 PLEKHG4Q58EX7 1191 aa6.09□□□□□ -1.43
SNRPF-202ENST00000549580 INTS3Q68E01 1043 aaKnown RBP6.09□□□□□ -1.43
SNRPF-202ENST00000549580 ENOX1Q8TC92 643 aaKnown RBP6.09□□□□□ -1.43
SNRPF-202ENST00000549580 DNAJC7Q99615 494 aa6.09□□□□□ -1.43
SNRPF-202ENST00000549580 GMIPQ9P107 970 aa6.09□□□□□ -1.43
SNRPF-202ENST00000549580 PPM1GO15355 546 aaPredicted RBP6.08□□□□□ -1.44
SNRPF-202ENST00000549580 GJB6O95452 261 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 MLECQ14165 292 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 CDCP2Q5VXM1 449 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 LARP1BQ659C4 914 aaKnown RBP6.08□□□□□ -1.44
SNRPF-202ENST00000549580 RPTNQ6XPR3 784 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 JMYQ8N9B5 988 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 LINC00116Q8NCU8 138 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 SH3TC2Q8TF17 1288 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 ATG4CQ96DT6 458 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 SPATA25Q9BR10 227 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 MRIQ9BWK5 157 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 C1QTNF3Q9BXJ4 246 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 SLITRK6Q9H5Y7 841 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 HCFC2Q9Y5Z7 792 aa6.08□□□□□ -1.44
SNRPF-202ENST00000549580 CCDC85CA6NKD9 419 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 UBOX5O94941 541 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 CLSTN1O94985 981 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 PRAMEF1O95521 474 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 ITGB3P05106 788 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 ACRP10323 421 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 IGFBP6P24592 240 aaPredicted RBP6.07□□□□□ -1.44
SNRPF-202ENST00000549580 ZNF200P98182 395 aaPredicted RBP6.07□□□□□ -1.44
SNRPF-202ENST00000549580 PPP2R5EQ16537 467 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 VWA3BQ502W6 1294 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 NT5DC1Q5TFE4 455 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 CPZQ66K79 652 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 OVOS1Q6IE37 1185 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 GALNT18Q6P9A2 607 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 ANKRD13AQ8IZ07 590 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 ZNF655Q8N720 491 aaPredicted RBP6.07□□□□□ -1.44
SNRPF-202ENST00000549580 ZNF669Q96BR6 464 aaPredicted RBP6.07□□□□□ -1.44
SNRPF-202ENST00000549580 RBM15Q96T37 977 aaKnown RBP eCLIP6.07□□□□□ -1.44
SNRPF-202ENST00000549580 CNNM2Q9H8M5 875 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 KANSL2Q9H9L4 492 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 TAF6LQ9Y6J9 622 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 DUSP10Q9Y6W6 482 aa6.07□□□□□ -1.44
SNRPF-202ENST00000549580 MEIS1O00470 390 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 TNFRSF10CO14798 259 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 PLA2G1BP04054 148 aaKnown RBP6.06□□□□□ -1.44
SNRPF-202ENST00000549580 C6P13671 934 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 NME1P15531 152 aaKnown RBP6.06□□□□□ -1.44
SNRPF-202ENST00000549580 CYP4F8P98187 520 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 IFRD2Q12894 506 aaPredicted RBP6.06□□□□□ -1.44
SNRPF-202ENST00000549580 NBPF9Q3BBW0 867 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 UNC5AQ6ZN44 842 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 NLRC3Q7RTR2 1065 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 FAM178BQ8IXR5 827 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 Q8N1X5 172 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 NUP43Q8NFH3 380 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 ST13P5Q8NFI4 369 aaPredicted RBP6.06□□□□□ -1.44
SNRPF-202ENST00000549580 DDX1Q92499 740 aaKnown RBP6.06□□□□□ -1.44
SNRPF-202ENST00000549580 TNFRSF12AQ9NP84 129 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 SLC12A7Q9Y666 1083 aa6.06□□□□□ -1.44
SNRPF-202ENST00000549580 LTBP3Q9NS15 1303 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 B2RBV5 119 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 POLR2BP30876 1174 aaKnown RBP6.05□□□□□ -1.44
SNRPF-202ENST00000549580 ARL4AP40617 200 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 CHMP4BP1P59074 171 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 ZYXQ15942 572 aaKnown RBP6.05□□□□□ -1.44
SNRPF-202ENST00000549580 PLEKHN1Q494U1 663 aaPredicted RBP6.05□□□□□ -1.44
SNRPF-202ENST00000549580 MRM1Q6IN84 353 aaKnown RBP6.05□□□□□ -1.44
SNRPF-202ENST00000549580 C6orf15Q6UXA7 325 aaPredicted RBP6.05□□□□□ -1.44
SNRPF-202ENST00000549580 SLCO6A1Q86UG4 719 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 ZNF512BQ96KM6 892 aaPredicted RBP6.05□□□□□ -1.44
SNRPF-202ENST00000549580 FCRL2Q96LA5 508 aaPredicted RBP6.05□□□□□ -1.44
SNRPF-202ENST00000549580 SLC9A7Q96T83 725 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 PRDM14Q9GZV8 571 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 USP40Q9NVE5 1235 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 ERVK13-1Q9NX77 482 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 TMEM260Q9NX78 707 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 TNFRSF10DQ9UBN6 386 aa6.05□□□□□ -1.44
SNRPF-202ENST00000549580 SUSD2Q9UGT4 822 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms