RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 PKN1Q16512 942 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 ANO1Q5XXA6 986 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 KRT40Q6A162 431 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 TMEM179Q6ZVK1 233 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 Q7L0L9 218 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 PLEKHH3Q7Z736 793 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 TDHQ8IZJ6 230 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 NUP133Q8WUM0 1156 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 CEP95Q96GE4 821 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 ZNF396Q96N95 335 aaPredicted RBP8.89□□□□□ -0.99
KDM1B-203ENST00000546309 NUP88Q99567 741 aaPredicted RBP8.89□□□□□ -0.99
KDM1B-203ENST00000546309 NUDT12Q9BQG2 462 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 SPZ1Q9BXG8 430 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 SH3GLB2Q9NR46 395 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 MAD2L2Q9UI95 211 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 RCOR1Q9UKL0 485 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 TMX2Q9Y320 296 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 RIPK3Q9Y572 518 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 DDX49Q9Y6V7 483 aaKnown RBP8.89□□□□□ -0.99
KDM1B-203ENST00000546309 MORC2Q9Y6X9 1032 aaPredicted RBP8.89□□□□□ -0.99
KDM1B-203ENST00000546309 CUL9Q8IWT3 2517 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 PRUNE2Q8WUY3 3088 aa8.89□□□□□ -0.99
KDM1B-203ENST00000546309 ASTN1O14525 1302 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 CNTNAP5Q8WYK1 1306 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 PRPF40AO75400 957 aaKnown RBP8.88□□□□□ -0.99
KDM1B-203ENST00000546309 EEF2P13639 858 aaKnown RBP8.88□□□□□ -0.99
KDM1B-203ENST00000546309 MAPK4P31152 587 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 BMP8BP34820 402 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 MAGEA10P43363 369 aaPredicted RBP8.88□□□□□ -0.99
KDM1B-203ENST00000546309 UBE2HP62256 183 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 AKAP17AQ02040 695 aaKnown RBP8.88□□□□□ -0.99
KDM1B-203ENST00000546309 DNM1Q05193 864 aaKnown RBP8.88□□□□□ -0.99
KDM1B-203ENST00000546309 ASPRV1Q53RT3 343 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 CCDC144CPQ8IYA2 1237 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 TRMT44Q8IYL2 757 aaKnown RBP8.88□□□□□ -0.99
KDM1B-203ENST00000546309 SRBD1Q8N5C6 995 aaKnown RBP8.88□□□□□ -0.99
KDM1B-203ENST00000546309 SOCS4Q8WXH5 440 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 PHKBQ93100 1093 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 LENG1Q96BZ8 264 aaPredicted RBP8.88□□□□□ -0.99
KDM1B-203ENST00000546309 SLC26A6Q9BXS9 759 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 FOXP1Q9H334 677 aaPredicted RBP8.88□□□□□ -0.99
KDM1B-203ENST00000546309 POLR3EQ9NVU0 708 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 ZNF214Q9UL59 606 aaPredicted RBP8.88□□□□□ -0.99
KDM1B-203ENST00000546309 STX8Q9UNK0 236 aa8.88□□□□□ -0.99
KDM1B-203ENST00000546309 SLC15A5A6NIM6 579 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 hCG_1984214I3L0E3 225 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 MMP1P03956 469 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 PARP1P09874 1014 aaKnown RBP8.87□□□□□ -0.99
KDM1B-203ENST00000546309 ERCC3P19447 782 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 ADORA2AP29274 412 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 EPHB4P54760 987 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 TRIM29Q14134 588 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 SAFBQ15424 915 aaKnown RBP eCLIP8.87□□□□□ -0.99
KDM1B-203ENST00000546309 PFKFB3Q16875 520 aaPredicted RBP8.87□□□□□ -0.99
KDM1B-203ENST00000546309 TMEM63BQ5T3F8 832 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 GPATCH4Q5T3I0 446 aaKnown RBP8.87□□□□□ -0.99
KDM1B-203ENST00000546309 GALNT17Q6IS24 598 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 GPR153Q6NV75 609 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 SH3RF1Q7Z6J0 888 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 RAB11FIP4Q86YS3 637 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 TEX2Q8IWB9 1127 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 ZNF713Q8N859 430 aaPredicted RBP8.87□□□□□ -0.99
KDM1B-203ENST00000546309 APBA2Q99767 749 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 LBHD1Q9BQE6 289 aaPredicted RBP8.87□□□□□ -0.99
KDM1B-203ENST00000546309 PHF20Q9BVI0 1012 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 SPATC1LQ9H0A9 340 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 RIOX1Q9H6W3 641 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 VCPKMTQ9H867 229 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 RTEL1Q9NZ71 1219 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 ISY1Q9ULR0 285 aaKnown RBP8.87□□□□□ -0.99
KDM1B-203ENST00000546309 STXBP5LQ9Y2K9 1186 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 V9GY48 417 aaPredicted RBP8.87□□□□□ -0.99
KDM1B-203ENST00000546309 MYH6P13533 1939 aa8.87□□□□□ -0.99
KDM1B-203ENST00000546309 UNC80Q8N2C7 3258 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 KLRF2D3W0D1 207 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 CTAGE5O15320 804 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 PLEKHA8P1O95397 391 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 YEATS4O95619 227 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 PGK2P07205 417 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 PDHBP11177 359 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 SCG2P13521 617 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 NCLP19338 710 aaKnown RBP8.86□□□□□ -0.99
KDM1B-203ENST00000546309 NASPP49321 788 aaPredicted RBP8.86□□□□□ -0.99
KDM1B-203ENST00000546309 COG2Q14746 738 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 WDR78Q5VTH9 848 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 FOXD4L5Q5VV16 416 aaPredicted RBP8.86□□□□□ -0.99
KDM1B-203ENST00000546309 MYSM1Q5VVJ2 828 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 FERMT3Q86UX7 667 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 DAGLBQ8NCG7 672 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 GMCL1P1Q8NEA9 526 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 LEO1Q8WVC0 666 aaPredicted RBP8.86□□□□□ -0.99
KDM1B-203ENST00000546309 FOXD4L4Q8WXT5 416 aaPredicted RBP8.86□□□□□ -0.99
KDM1B-203ENST00000546309 VWCEQ96DN2 955 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 CABP5Q9NP86 173 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 PRKAG2Q9UGJ0 569 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 CNPY2Q9Y2B0 182 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 MYH15Q9Y2K3 1946 aa8.86□□□□□ -0.99
KDM1B-203ENST00000546309 CHD9Q3L8U1 2897 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 DNAJC25-GNG10A0A024R161 153 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 TRIM43BA6NCK2 446 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms