RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 LRRN4CLQ8ND94 238 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
PAAF1-215ENST00000544909 EDEM3Q9BZQ6 932 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 EHD4Q9H223 541 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 GREB1LQ9C091 1923 aaPredicted RBP13.94□□□□□ -0.18
PAAF1-215ENST00000544909 ANO9A1A5B4 782 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 ADAMTS3O15072 1205 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 IPO7O95373 1038 aaKnown RBP13.94□□□□□ -0.18
PAAF1-215ENST00000544909 SERPINB2P05120 415 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 MCM3P25205 808 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 ARHGAP25P42331 645 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 GRIK5Q16478 980 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 LETM2Q2VYF4 491 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 UNC13DQ70J99 1090 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 SV2BQ7L1I2 683 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 CCDC84Q86UT8 332 aaPredicted RBP13.94□□□□□ -0.18
PAAF1-215ENST00000544909 PROM2Q8N271 834 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 TXLNBQ8N3L3 684 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 TBCKQ8TEA7 893 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 TUBGCP2Q9BSJ2 902 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 TSGA10Q9BZW7 698 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 LZTFL1Q9NQ48 299 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 TTC26A0AVF1 554 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 KRT86O43790 486 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 TTLL1O95922 423 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 ADCY7P51828 1080 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 PDE4DQ08499 809 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 PTPN21Q16825 1174 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 KIF4BQ2VIQ3 1234 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 ZNF569Q5MCW4 686 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 CPLX3Q8WVH0 158 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 CCDC17Q96LX7 622 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 DUSP9Q99956 384 aaKnown RBP13.93□□□□□ -0.18
PAAF1-215ENST00000544909 MRIQ9BWK5 157 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 RIC8AQ9NPQ8 531 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 DAGLAQ9Y4D2 1042 aa13.93□□□□□ -0.18
PAAF1-215ENST00000544909 PNMA6FA0A0J9YX94 578 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 EIF3CLB5ME19 914 aaKnown RBP13.92□□□□□ -0.18
PAAF1-215ENST00000544909 ASIC1P78348 528 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 AMPD2Q01433 879 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 CALCRLQ16602 461 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 TEX35Q5T0J7 233 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 FKBP15Q5T1M5 1219 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 HHIPL2Q6UWX4 724 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 MTMR8Q96EF0 704 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 EIF3CQ99613 913 aaKnown RBP13.92□□□□□ -0.18
PAAF1-215ENST00000544909 SAP30BPQ9UHR5 308 aaKnown RBP13.92□□□□□ -0.18
PAAF1-215ENST00000544909 JAG2Q9Y219 1238 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 KDM3AQ9Y4C1 1321 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
PAAF1-215ENST00000544909 TRIM21P19474 475 aaKnown RBP13.92□□□□□ -0.18
PAAF1-215ENST00000544909 CDC25AP30304 524 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 ZNF543Q08ER8 600 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 HYIQ5T013 277 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 USP17L2Q6R6M4 530 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 MOXD1Q6UVY6 613 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 KCTD17Q8N5Z5 321 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 LARP4BQ92615 738 aaKnown RBP13.92□□□□□ -0.18
PAAF1-215ENST00000544909 RUBCNQ92622 972 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 MMTAG2Q9BU76 263 aaKnown RBP13.92□□□□□ -0.18
PAAF1-215ENST00000544909 PARD6BQ9BYG5 372 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 NT5C3AQ9H0P0 336 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 LRWD1Q9UFC0 647 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 SERPINB13Q9UIV8 391 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 ATP6V0A2Q9Y487 856 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 NRXN2Q9P2S2 1712 aa13.92□□□□□ -0.18
PAAF1-215ENST00000544909 CTAGE15A4D2H0 777 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 PP2D1A8MPX8 630 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 TBC1D8O95759 1140 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 CTAGE8P0CG41 777 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 CLK2P49760 499 aaKnown RBP13.91□□□□□ -0.18
PAAF1-215ENST00000544909 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
PAAF1-215ENST00000544909 PMS1P54277 932 aaKnown RBP13.91□□□□□ -0.18
PAAF1-215ENST00000544909 FKBP1AP62942 108 aaKnown RBP13.91□□□□□ -0.18
PAAF1-215ENST00000544909 EHHADHQ08426 723 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 GPS2Q13227 327 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 TMEM119Q4V9L6 283 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 KRT79Q5XKE5 535 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 CTAGE6Q86UF2 777 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 CTAGE4Q8IX94 777 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 CCDC24Q8N4L8 307 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 CNOT6LQ96LI5 555 aaKnown RBP13.91□□□□□ -0.18
PAAF1-215ENST00000544909 PIGSQ96S52 555 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 POLLQ9UGP5 575 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 STK24Q9Y6E0 443 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 MYH8P13535 1937 aa13.91□□□□□ -0.18
PAAF1-215ENST00000544909 TRIM49BA6NDI0 452 aa13.9□□□□□ -0.18
PAAF1-215ENST00000544909 MAP2K7O14733 419 aa13.9□□□□□ -0.18
PAAF1-215ENST00000544909 CKAP4Q07065 602 aaKnown RBP13.9□□□□□ -0.18
PAAF1-215ENST00000544909 TBC1D8BQ0IIM8 1120 aa13.9□□□□□ -0.18
PAAF1-215ENST00000544909 PAPD7Q5XG87 772 aaKnown RBP13.9□□□□□ -0.18
PAAF1-215ENST00000544909 WDR93Q6P2C0 686 aa13.9□□□□□ -0.18
PAAF1-215ENST00000544909 SMIM5Q71RC9 77 aa13.9□□□□□ -0.18
PAAF1-215ENST00000544909 SLC35F6Q8N357 371 aa13.9□□□□□ -0.18
PAAF1-215ENST00000544909 ACRBPQ8NEB7 543 aa13.9□□□□□ -0.18
PAAF1-215ENST00000544909 CDK5RAP3Q96JB5 506 aa13.9□□□□□ -0.18
PAAF1-215ENST00000544909 NUCKS1Q9H1E3 243 aaKnown RBP13.9□□□□□ -0.18
PAAF1-215ENST00000544909 PLAGL2Q9UPG8 496 aa13.9□□□□□ -0.18
PAAF1-215ENST00000544909 POLRMTO00411 1230 aaKnown RBP13.9□□□□□ -0.18
PAAF1-215ENST00000544909 HLA-DOAP06340 250 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms