RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 CCNHP51946 323 aaPredicted RBP20.21■□□□□ 0.83
CCT4-204ENST00000544079 ELF3P78545 371 aaPredicted RBP20.21■□□□□ 0.83
CCT4-204ENST00000544079 E2F5Q15329 346 aa20.21■□□□□ 0.83
CCT4-204ENST00000544079 GKAP1Q5VSY0 366 aaPredicted RBP20.21■□□□□ 0.83
CCT4-204ENST00000544079 ZNF496Q96IT1 587 aaPredicted RBP20.21■□□□□ 0.83
CCT4-204ENST00000544079 TUBGCP2Q9BSJ2 902 aa20.21■□□□□ 0.83
CCT4-204ENST00000544079 TLR10Q9BXR5 811 aa20.21■□□□□ 0.83
CCT4-204ENST00000544079 NOD2Q9HC29 1040 aa20.21■□□□□ 0.83
CCT4-204ENST00000544079 GUCY2DQ02846 1103 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 BYSLQ13895 437 aaKnown RBP20.2■□□□□ 0.82
CCT4-204ENST00000544079 MSL1Q68DK7 614 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 CDCA2Q69YH5 1023 aaPredicted RBP20.2■□□□□ 0.82
CCT4-204ENST00000544079 HVCN1Q96D96 273 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 MLXIPQ9HAP2 919 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 GDAQ9Y2T3 454 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 COL22A1Q8NFW1 1626 aaPredicted RBP20.2■□□□□ 0.82
CCT4-204ENST00000544079 AKAP11Q9UKA4 1901 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 B4DLN1 442 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 PSMA7O14818 248 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 PPIP5K2O43314 1243 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 ADCY2Q08462 1091 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 WTAPQ15007 396 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 ZSCAN29Q8IWY8 852 aaPredicted RBP20.2■□□□□ 0.82
CCT4-204ENST00000544079 RNF217Q8TC41 542 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 SMCR8Q8TEV9 937 aaPredicted RBP20.2■□□□□ 0.82
CCT4-204ENST00000544079 STAMQ92783 540 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 ZNF594Q96JF6 807 aaPredicted RBP20.2■□□□□ 0.82
CCT4-204ENST00000544079 PUS3Q9BZE2 481 aaKnown RBP20.2■□□□□ 0.82
CCT4-204ENST00000544079 SWAP70Q9UH65 585 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 LTBP4Q8N2S1 1624 aa20.2■□□□□ 0.82
CCT4-204ENST00000544079 PES1O00541 588 aaKnown RBP20.19■□□□□ 0.82
CCT4-204ENST00000544079 SPRED3Q2MJR0 410 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 TTC38Q5R3I4 469 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 MAATS1Q7Z4T9 603 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 ANKLE2Q86XL3 938 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 FANCBQ8NB91 859 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 CASKIN2Q8WXE0 1202 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 DHTKD1Q96HY7 919 aaPredicted RBP20.19■□□□□ 0.82
CCT4-204ENST00000544079 TRIM47Q96LD4 638 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 ZNF142P52746 1687 aaPredicted RBP20.19■□□□□ 0.82
CCT4-204ENST00000544079 LIN7AO14910 233 aaPredicted RBP20.19■□□□□ 0.82
CCT4-204ENST00000544079 SSBP05455 408 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCT4-204ENST00000544079 MYBP10242 640 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 TRAPPC10P48553 1259 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 BIRC2Q13490 618 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 AKNAD1Q5T1N1 836 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 TTI2Q6NXR4 508 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 C14orf37Q86TY3 774 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 LRRC45Q96CN5 670 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 TAF1DQ9H5J8 278 aaPredicted RBP20.19■□□□□ 0.82
CCT4-204ENST00000544079 RIPOR2Q9Y4F9 1068 aa20.19■□□□□ 0.82
CCT4-204ENST00000544079 MYH2Q9UKX2 1941 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 H0YGN5 161 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 KIF11P52732 1056 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 PPP2R2AP63151 447 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 MRPS25P82663 173 aaKnown RBP20.18■□□□□ 0.82
CCT4-204ENST00000544079 IFT81Q8WYA0 676 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 NOX5Q96PH1 765 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 NFS1Q9Y697 457 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 TRIM49BA6NDI0 452 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 FAM205CA6NFA0 338 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 CFAP73A6NFT4 308 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 CUL1Q13616 776 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 QPCTQ16769 361 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 KLHDC7AQ5VTJ3 777 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 TNFRSF25Q93038 417 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 CENPTQ96BT3 561 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 STRBPQ96SI9 672 aaKnown RBP20.18■□□□□ 0.82
CCT4-204ENST00000544079 ISCUQ9H1K1 167 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 C15orf41Q9Y2V0 281 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
CCT4-204ENST00000544079 ERICH2A1L162 156 aa20.17■□□□□ 0.82
CCT4-204ENST00000544079 PATL2C9JE40 543 aaKnown RBP20.17■□□□□ 0.82
CCT4-204ENST00000544079 ORC4O43929 436 aa20.17■□□□□ 0.82
CCT4-204ENST00000544079 GCKP35557 465 aa20.17■□□□□ 0.82
CCT4-204ENST00000544079 PPP1R2P41236 205 aa20.17■□□□□ 0.82
CCT4-204ENST00000544079 INHBEP58166 350 aa20.17■□□□□ 0.82
CCT4-204ENST00000544079 PTGDRQ13258 359 aa20.17■□□□□ 0.82
CCT4-204ENST00000544079 TCP11Q8WWU5 503 aa20.17■□□□□ 0.82
CCT4-204ENST00000544079 BSDC1Q9NW68 430 aaPredicted RBP20.17■□□□□ 0.82
CCT4-204ENST00000544079 BUB1BO60566 1050 aaPredicted RBP20.16■□□□□ 0.82
CCT4-204ENST00000544079 HPDP32754 393 aaPredicted RBP20.16■□□□□ 0.82
CCT4-204ENST00000544079 GUCY2FP51841 1108 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 GRIPAP1Q4V328 841 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 AP1ARQ63HQ0 302 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 ARL6IP4Q66PJ3 421 aaKnown RBP20.16■□□□□ 0.82
CCT4-204ENST00000544079 KRT26Q7Z3Y9 468 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 CNOT10Q9H9A5 744 aaKnown RBP20.16■□□□□ 0.82
CCT4-204ENST00000544079 SMARCAL1Q9NZC9 954 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 ARHGAP20Q9P2F6 1191 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 BICDL2A1A5D9 508 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 RHOBTB3O94955 611 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 CXCR5P32302 372 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 LONP1P36776 959 aaKnown RBP20.16■□□□□ 0.82
CCT4-204ENST00000544079 TNNC1P63316 161 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 MTMR3Q13615 1198 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 EARS2Q5JPH6 523 aaKnown RBP20.16■□□□□ 0.82
CCT4-204ENST00000544079 FKBP15Q5T1M5 1219 aa20.16■□□□□ 0.82
CCT4-204ENST00000544079 GIMAP8Q8ND71 665 aaPredicted RBP20.16■□□□□ 0.82
CCT4-204ENST00000544079 LMBR1Q8WVP7 490 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms