RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 KMT5BQ4FZB7 885 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 ODR4Q5SWX8 454 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 ZNF589Q86UQ0 364 aaPredicted RBP7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 OSBPL3Q9H4L5 887 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 RPAP1Q9BWH6 1393 aaPredicted RBP7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 HSF2BPO75031 334 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 ZSCAN20P17040 1043 aaPredicted RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 HOXD10P28358 340 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 TNNC1P63316 161 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 CDC37Q16543 378 aaPredicted RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 ARHGAP44Q17R89 818 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 ADALQ6DHV7 355 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 DHX38Q92620 1227 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 JAKMIP2Q96AA8 810 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 NAP1L3Q99457 506 aaPredicted RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 ISCA1Q9BUE6 129 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 C1orf112Q9NSG2 853 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 TAB2Q9NYJ8 693 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 MTRF1LQ9UGC7 380 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 SFMBT1Q9UHJ3 866 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 ZNRF3Q9ULT6 936 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 PCDHA4Q9UN74 947 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 CLTCQ00610 1675 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 SOS2Q07890 1332 aaPredicted RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 TRAPPC10P48553 1259 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 TOMM20Q15388 145 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 ZNF569Q5MCW4 686 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 FAM26FQ5R3K3 315 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 CEP120Q8N960 986 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 FBXO18Q8NFZ0 1043 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 SH3RF3Q8TEJ3 882 aaPredicted RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 ZNF830Q96NB3 372 aaPredicted RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 PANK4Q9NVE7 773 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 ARMCX3Q9UH62 379 aaPredicted RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 SPATA31A5Q5VU36 1347 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 SPATA31A7Q8IWB4 1347 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 LAD1O00515 517 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 DLATP10515 647 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 EIF2AK2P19525 551 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 LONP1P36776 959 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 RNASELQ05823 741 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 KLHL30Q0D2K2 578 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC63Q8NA47 563 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 POMGNT1Q8WZA1 660 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC127Q96BQ5 260 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 OTUD5Q96G74 571 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 CAPZA3Q96KX2 299 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 TTC14Q96N46 770 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 KIAA1024Q9UPX6 916 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 SPHKAPQ2M3C7 1700 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 CAMSAP1Q5T5Y3 1602 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 USP17L10C9JJH3 530 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 CAPN9O14815 690 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 N4BP1O75113 896 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 LMNB1P20700 586 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 NLRP12P59046 1061 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 GPSM2P81274 684 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 LRMPQ12912 555 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 EPHA10Q5JZY3 1008 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 TRMT2AQ8IZ69 625 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 SLC17A8Q8NDX2 589 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 CEP170P1Q96L14 293 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 NACC1Q96RE7 527 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 SRRTQ9BXP5 876 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 LSG1Q9H089 658 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 CCSER2Q9H7U1 834 aa7.59□□□□□ -1.19
SRGAP1-206ENST00000543397 SPP2Q13103 211 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 TRIM28Q13263 835 aaKnown RBP7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 KIAA1841Q6NSI8 718 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 RNF207Q6ZRF8 634 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 DGKHQ86XP1 1220 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 USP28Q96RU2 1077 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 CRAMP1Q96RY5 1269 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 TLR3O15455 904 aaKnown RBP7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 SHQ1Q6PI26 577 aaKnown RBP7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 UBL4BQ8N7F7 174 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 GABPB2Q8TAK5 448 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 RASGRP4Q8TDF6 673 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 ZSWIM5Q9P217 1185 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 USTQ9Y2C2 406 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 DIP2CQ9Y2E4 1556 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 CPDO75976 1380 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 PFKFB1P16118 471 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 FANCCQ00597 558 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 CFAP58Q5T655 872 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 PRR5LQ6MZQ0 368 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 CCDC25Q86WR0 208 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 TBCKQ8TEA7 893 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 NUCKS1Q9H1E3 243 aaKnown RBP7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 AGLP35573 1532 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 PDXDC2PQ6P474 469 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 ZNF662Q6ZS27 426 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 ZNF365Q70YC5 407 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 STRBPQ96SI9 672 aaKnown RBP7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 SLF1Q9BQI6 1058 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 PARP2Q9UGN5 583 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 UNC13BO14795 1591 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 STAT1P42224 750 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 SCRN1Q12765 414 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms