RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 RPGRIP1Q96KN7 1286 aa18.79■□□□□ 0.6
CACNB3-203ENST00000540990 CD209Q9NNX6 404 aa18.79■□□□□ 0.6
CACNB3-203ENST00000540990 CCNL1Q9UK58 526 aaPredicted RBP18.79■□□□□ 0.6
CACNB3-203ENST00000540990 PVALEFA0A1B0GWK0 134 aa18.79■□□□□ 0.6
CACNB3-203ENST00000540990 ANO9A1A5B4 782 aa18.79■□□□□ 0.6
CACNB3-203ENST00000540990 CCNT1O60563 726 aaKnown RBP18.79■□□□□ 0.6
CACNB3-203ENST00000540990 GOLGA8HP0CJ92 632 aa18.79■□□□□ 0.6
CACNB3-203ENST00000540990 ATP2B4P23634 1241 aa18.79■□□□□ 0.6
CACNB3-203ENST00000540990 LETM2Q2VYF4 491 aa18.79■□□□□ 0.6
CACNB3-203ENST00000540990 EXOC4Q96A65 974 aa18.79■□□□□ 0.6
CACNB3-203ENST00000540990 CNOT6LQ96LI5 555 aaKnown RBP18.79■□□□□ 0.6
CACNB3-203ENST00000540990 ABCB6Q9NP58 842 aa18.79■□□□□ 0.6
CACNB3-203ENST00000540990 CALCOCO1Q9P1Z2 691 aa18.79■□□□□ 0.6
CACNB3-203ENST00000540990 H3BQF6 201 aa18.78■□□□□ 0.6
CACNB3-203ENST00000540990 POLR3GO15318 223 aaPredicted RBP18.78■□□□□ 0.6
CACNB3-203ENST00000540990 VSNL1P62760 191 aa18.78■□□□□ 0.6
CACNB3-203ENST00000540990 TBC1D8BQ0IIM8 1120 aa18.78■□□□□ 0.6
CACNB3-203ENST00000540990 CRY2Q49AN0 593 aa18.78■□□□□ 0.6
CACNB3-203ENST00000540990 TXLNBQ8N3L3 684 aa18.78■□□□□ 0.6
CACNB3-203ENST00000540990 PLIN2Q99541 437 aa18.78■□□□□ 0.6
CACNB3-203ENST00000540990 SAP30BPQ9UHR5 308 aaKnown RBP18.78■□□□□ 0.6
CACNB3-203ENST00000540990 GUCA1BQ9UMX6 200 aa18.78■□□□□ 0.6
CACNB3-203ENST00000540990 THSD7AQ9UPZ6 1657 aa18.78■□□□□ 0.6
CACNB3-203ENST00000540990 KRT86O43790 486 aa18.77■□□□□ 0.6
CACNB3-203ENST00000540990 ASIC1P78348 528 aa18.77■□□□□ 0.6
CACNB3-203ENST00000540990 SOGA3Q5TF21 947 aa18.77■□□□□ 0.6
CACNB3-203ENST00000540990 TEX11Q8IYF3 940 aa18.77■□□□□ 0.6
CACNB3-203ENST00000540990 KIAA0895Q8NCT3 520 aa18.77■□□□□ 0.6
CACNB3-203ENST00000540990 TBCKQ8TEA7 893 aa18.77■□□□□ 0.6
CACNB3-203ENST00000540990 ZNHIT6Q9NWK9 470 aaKnown RBP18.77■□□□□ 0.6
CACNB3-203ENST00000540990 TRIM10Q9UDY6 481 aa18.77■□□□□ 0.6
CACNB3-203ENST00000540990 SEC63Q9UGP8 760 aaKnown RBP18.77■□□□□ 0.6
CACNB3-203ENST00000540990 SNHG28P0DPA3 235 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 USP14P54578 494 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 GPSM2P81274 684 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 GPS2Q13227 327 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 GRB10Q13322 594 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 CCDC122Q5T0U0 273 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 UNC13DQ70J99 1090 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 SLF2Q8IX21 1173 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 REXO1Q8N1G1 1221 aaKnown RBP18.77■□□□□ 0.59
CACNB3-203ENST00000540990 NOA1Q8NC60 698 aaKnown RBP18.77■□□□□ 0.59
CACNB3-203ENST00000540990 CALML4Q96GE6 196 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 BLOC1S4Q9NUP1 217 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 AGPAT5Q9NUQ2 364 aa18.77■□□□□ 0.59
CACNB3-203ENST00000540990 TARSL2A2RTX5 802 aaKnown RBP18.76■□□□□ 0.59
CACNB3-203ENST00000540990 EIF3JO75822 258 aaKnown RBP18.76■□□□□ 0.59
CACNB3-203ENST00000540990 TFRCP02786 760 aaKnown RBP18.76■□□□□ 0.59
CACNB3-203ENST00000540990 PDIA5Q14554 519 aa18.76■□□□□ 0.59
CACNB3-203ENST00000540990 USP17L2Q6R6M4 530 aa18.76■□□□□ 0.59
CACNB3-203ENST00000540990 CNBD1Q8NA66 436 aa18.76■□□□□ 0.59
CACNB3-203ENST00000540990 JAKMIP2Q96AA8 810 aa18.76■□□□□ 0.59
CACNB3-203ENST00000540990 CEP95Q96GE4 821 aa18.76■□□□□ 0.59
CACNB3-203ENST00000540990 PIGSQ96S52 555 aa18.76■□□□□ 0.59
CACNB3-203ENST00000540990 SEMA6BQ9H3T3 888 aa18.76■□□□□ 0.59
CACNB3-203ENST00000540990 NHEJ1Q9H9Q4 299 aaPredicted RBP18.76■□□□□ 0.59
CACNB3-203ENST00000540990 ZCCHC17Q9NP64 241 aaKnown RBP18.76■□□□□ 0.59
CACNB3-203ENST00000540990 PODXL2Q9NZ53 605 aa18.76■□□□□ 0.59
CACNB3-203ENST00000540990 SAR1BQ9Y6B6 198 aa18.76■□□□□ 0.59
CACNB3-203ENST00000540990 FOCADQ5VW36 1801 aa18.76■□□□□ 0.59
CACNB3-203ENST00000540990 EDIL3O43854 480 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 FCER1AP12319 257 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 TRIM21P19474 475 aaKnown RBP18.75■□□□□ 0.59
CACNB3-203ENST00000540990 MCM3P25205 808 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 TECP42680 631 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 CKAP4Q07065 602 aaKnown RBP18.75■□□□□ 0.59
CACNB3-203ENST00000540990 EHHADHQ08426 723 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 MUM1L1Q5H9M0 696 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 NCAPH2Q6IBW4 605 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 SV2BQ7L1I2 683 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 GUF1Q8N442 669 aaKnown RBP18.75■□□□□ 0.59
CACNB3-203ENST00000540990 PNMA5Q96PV4 448 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 NOC4LQ9BVI4 516 aaKnown RBP18.75■□□□□ 0.59
CACNB3-203ENST00000540990 VIPAS39Q9H9C1 493 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 SIK3Q9Y2K2 1263 aa18.75■□□□□ 0.59
CACNB3-203ENST00000540990 IGKV6D-41A0A0C4DH26 115 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 LCA5LO95447 670 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 ATP1A1P05023 1023 aaKnown RBP18.74■□□□□ 0.59
CACNB3-203ENST00000540990 PDHBP11177 359 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 RFC4P35249 363 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 MTIF2P46199 727 aaKnown RBP18.74■□□□□ 0.59
CACNB3-203ENST00000540990 ST5P78524 1137 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 ASPRV1Q53RT3 343 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 TRAPPC3LQ5T215 181 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 PPP1R18Q6NYC8 613 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 TBC1D22AQ8WUA7 517 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 TSGA10Q9BZW7 698 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 CPVLQ9H3G5 476 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 PLAGL2Q9UPG8 496 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 RCCD1A6NED2 376 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 RHOXF2BP0C7M4 288 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 ADRA2BP18089 450 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 VAV2P52735 878 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 GABPAQ06546 454 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 FKBP15Q5T1M5 1219 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 ARHGAP27Q6ZUM4 889 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 KIAA1328Q86T90 577 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
CACNB3-203ENST00000540990 RHOXF2Q9BQY4 288 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms