RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 FAM160B2Q86V87 743 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 FAM43AQ8N2R8 423 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 MB21D1Q8N884 522 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 PRPF38AQ8NAV1 312 aaKnown RBP7.55□□□□□ -1.2
SNHG1-212ENST00000539975 CTCFLQ8NI51 663 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-212ENST00000539975 DCAF4Q8WV16 495 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 ZIC5Q96T25 663 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 TMEM47Q9BQJ4 181 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 ASCC2Q9H1I8 757 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-212ENST00000539975 IL17RBQ9NRM6 502 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 FEM1BQ9UK73 627 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 PNMA2Q9UL42 364 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 SLC12A7Q9Y666 1083 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 NAV1Q8NEY1 1877 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 PLIN4Q96Q06 1357 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 MYH7P12883 1935 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 MYO5AQ9Y4I1 1855 aaKnown RBP7.54□□□□□ -1.2
SNHG1-212ENST00000539975 POLR2AP24928 1970 aaKnown RBP7.54□□□□□ -1.2
SNHG1-212ENST00000539975 IGKV6D-41A0A0C4DH26 115 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 ZBBXA8MT70 800 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 TMEM232C9JQI7 657 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 FKTNO75072 461 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 NDUFB10O96000 172 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 PARP1P09874 1014 aaKnown RBP7.54□□□□□ -1.2
SNHG1-212ENST00000539975 CYP2C8P10632 490 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 CASTP20810 708 aaKnown RBP7.54□□□□□ -1.2
SNHG1-212ENST00000539975 HOXD10P28358 340 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 GRM5P41594 1212 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 GNAQP50148 359 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 MCCD1P59942 119 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-212ENST00000539975 HERVK_113P62684 666 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 SP3Q02447 781 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 TRAF1Q13077 416 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 CRHR2Q13324 411 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 NNTQ13423 1086 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 PLS1Q14651 629 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 ANKRD1Q15327 319 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 FAM83BQ5T0W9 1011 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 GPAT2Q6NUI2 795 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 CATSPERGQ6ZRH7 1159 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 VASH1Q7L8A9 365 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-212ENST00000539975 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 CLEC10AQ8IUN9 316 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 ENAHQ8N8S7 591 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-212ENST00000539975 GPRC5AQ8NFJ5 357 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 ADAM32Q8TC27 787 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 NUP133Q8WUM0 1156 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 KIFC2Q96AC6 838 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 CHMP4CQ96CF2 233 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 ERO1AQ96HE7 468 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 GMCL1Q96IK5 515 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 PTPN18Q99952 460 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 SLF1Q9BQI6 1058 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 OCSTAMPQ9BR26 566 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 PAGR1Q9BTK6 254 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 SNX14Q9Y5W7 946 aa7.54□□□□□ -1.2
SNHG1-212ENST00000539975 MYPNQ86TC9 1320 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 WDR19Q8NEZ3 1342 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 MYH1P12882 1939 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 CCDC196A0A1B0GTZ2 297 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 GPR25O00155 361 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 GNRH1P01148 92 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 COPB2P35606 906 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 LIFRP42702 1097 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 FCGRTP55899 365 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 PPP2R5BQ15173 497 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 ASPRV1Q53RT3 343 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 NOM1Q5C9Z4 860 aaKnown RBP7.53□□□□□ -1.2
SNHG1-212ENST00000539975 WDR78Q5VTH9 848 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 RUFY3Q7L099 469 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 CYB5R4Q7L1T6 521 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 SIAH1Q8IUQ4 282 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 MB21D2Q8IYB1 491 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-212ENST00000539975 ANKRD13CQ8N6S4 541 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 ANKS1AQ92625 1134 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 COA7Q96BR5 231 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 P2RX7Q99572 595 aaKnown RBP7.53□□□□□ -1.2
SNHG1-212ENST00000539975 LZTS2Q9BRK4 669 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 CFHR5Q9BXR6 569 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 C22orf23Q9BZE7 217 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 TM6SF1Q9BZW5 370 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 CPA4Q9UI42 421 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 RABGAP1Q9Y3P9 1069 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 IVNS1ABPQ9Y6Y0 642 aa7.53□□□□□ -1.2
SNHG1-212ENST00000539975 DDAH1O94760 285 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 RPS6KB1P23443 525 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 MAPK4P31152 587 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 LBX1P52954 281 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 DGKZQ13574 1117 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 FAM110CQ1W6H9 321 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 NBPF20Q3BBV1 942 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 C8orf34Q49A92 452 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 CPLX2Q6PUV4 134 aaKnown RBP7.52□□□□□ -1.21
SNHG1-212ENST00000539975 STOX1Q6ZVD7 989 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 KCTD1Q719H9 257 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 IGDCC4Q8TDY8 1250 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 KCNB2Q92953 911 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 NUP88Q99567 741 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-212ENST00000539975 PDRG1Q9NUG6 133 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 SLC5A4Q9NY91 659 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms