RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ADD2P35612 726 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 MYL7Q01449 175 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 PTK2Q05397 1052 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 ADAM9Q13443 819 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 LRRC24Q50LG9 513 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 LRCH2Q5VUJ6 765 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 CMTR1Q8N1G2 835 aaKnown RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 SYMPKQ92797 1274 aaKnown RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 DDX17Q92841 729 aaKnown RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 MAP4K1Q92918 833 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 CDHR1Q96JP9 859 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 PAGR1Q9BTK6 254 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 WDR11Q9BZH6 1224 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 ZMYND15Q9H091 742 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 ST7Q9NRC1 585 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 TMEM191BP0C7N4 346 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 POLR2FP61218 127 aaKnown RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 POLA2Q14181 598 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 EAPPQ56P03 285 aaPredicted RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 MIS18BP1Q6P0N0 1132 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 A0A1W2PQ27 194 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 A0A1W2PQ64 194 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 A0A1W2PQD8 194 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 OAS2P29728 719 aaKnown RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 PSMC2P35998 433 aaKnown RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 MFAP3P55082 362 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 APBA1Q02410 837 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 PRKG1Q13976 671 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 SCYL2Q6P3W7 929 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 LSG1Q9H089 658 aaKnown RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 STK17AQ9UEE5 414 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 EPN1Q9Y6I3 576 aaPredicted RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 ABCC12Q96J65 1359 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 ABCB4P21439 1286 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 STX2P32856 288 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 LONRF3Q496Y0 759 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 GSDMAQ96QA5 445 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 UIMC1Q96RL1 719 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 RPS6KC1Q96S38 1066 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 CLIC4Q9Y696 253 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 CTNNA1P35221 906 aaKnown RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 COPB1P53618 953 aaKnown RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 USP14P54578 494 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 PPP2R5CQ13362 524 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 BIRC2Q13490 618 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 PLCB4Q15147 1175 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 FAM26FQ5R3K3 315 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 SEPT14Q6ZU15 432 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 FBXO18Q8NFZ0 1043 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 HVCN1Q96D96 273 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 TRPM1Q7Z4N2 1603 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 ERVV-1B6SEH8 477 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 ADCY8P40145 1251 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 NAA25Q14CX7 972 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 NCAPG2Q86XI2 1143 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 CACTINQ8WUQ7 758 aaKnown RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 CNOT6LQ96LI5 555 aaKnown RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 ADD3Q9UEY8 706 aaKnown RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 PPP2R2CQ9Y2T4 447 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 USP6P35125 1406 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 LRRIQ1Q96JM4 1722 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 RPAP1Q9BWH6 1393 aaPredicted RBP7.09□□□□□ -1.27
LSAMP-207ENST00000539563 KCNQ3O43525 872 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 CCND2P30279 289 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 SUPT20HL1Q3ZLR7 823 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 MRFAP1L1Q96HT8 127 aa7.09□□□□□ -1.27
LSAMP-207ENST00000539563 ATF2P15336 505 aa7.09□□□□□ -1.28
LSAMP-207ENST00000539563 PTPREP23469 700 aa7.09□□□□□ -1.28
LSAMP-207ENST00000539563 KIAA0825Q8IV33 1275 aa7.09□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF577Q9BSK1 485 aa7.09□□□□□ -1.28
LSAMP-207ENST00000539563 TMEM206Q9H813 350 aa7.09□□□□□ -1.28
LSAMP-207ENST00000539563 LRRIQ4A6NIV6 560 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 H2AFZP0C0S5 128 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 CRKLP46109 303 aaKnown RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 ARHGAP4P98171 946 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 FAM47CQ5HY64 1035 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 H2AFVQ71UI9 128 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 ATP6V0A1Q93050 837 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 SEPT9Q9UHD8 586 aaPredicted RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 PCDHA7Q9UN72 937 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 BTBD18B2RXH4 712 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 EEF1GP26641 437 aaKnown RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 CCNA1P78396 465 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF658Q5TYW1 1059 aaPredicted RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 ACCSQ96QU6 501 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 PODXL2Q9NZ53 605 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 TRPC5Q9UL62 973 aaPredicted RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 PCDHA1Q9Y5I3 950 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 PASKQ96RG2 1323 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 ARHGEF37A1IGU5 675 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF233A6NK53 670 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 ERCC3P19447 782 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 CDKL2Q92772 493 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 NBPF3Q9H094 633 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 SLC39A2Q9NP94 309 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 FAM114A2Q9NRY5 505 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 PCDHB4Q9Y5E5 795 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 A6NJR5 290 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 PHKA1P46020 1223 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 SCNN1DP51172 638 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms