RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 GPAT2Q6NUI2 795 aa23.52■■□□□ 1.36
COPS7A-208ENST00000538410 PIK3AP1Q6ZUJ8 805 aa23.52■■□□□ 1.36
COPS7A-208ENST00000538410 FTOQ9C0B1 505 aaKnown RBP eCLIP23.52■■□□□ 1.36
COPS7A-208ENST00000538410 POLR3EQ9NVU0 708 aa23.52■■□□□ 1.36
COPS7A-208ENST00000538410 RTEL1Q9NZ71 1219 aa23.52■■□□□ 1.36
COPS7A-208ENST00000538410 BIN2Q9UBW5 565 aaPredicted RBP23.52■■□□□ 1.36
COPS7A-208ENST00000538410 CTDP1Q9Y5B0 961 aaPredicted RBP23.52■■□□□ 1.36
COPS7A-208ENST00000538410 CCDC194A0A1B0GVG4 234 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 SPDYE16A6NNV3 312 aaPredicted RBP23.51■■□□□ 1.35
COPS7A-208ENST00000538410 PRPF40AO75400 957 aaKnown RBP23.51■■□□□ 1.35
COPS7A-208ENST00000538410 CLK2P49760 499 aaKnown RBP23.51■■□□□ 1.35
COPS7A-208ENST00000538410 RGS19P49795 217 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 CEBPZQ03701 1054 aaKnown RBP23.51■■□□□ 1.35
COPS7A-208ENST00000538410 CSPP1Q1MSJ5 1256 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 KRT25Q7Z3Z0 450 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 REPS2Q8NFH8 660 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 SPATA32Q96LK8 384 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 AGBL1Q96MI9 1066 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 LMBRD1Q9NUN5 540 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 PNMA2Q9UL42 364 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 CCPG1Q9ULG6 757 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 NOL7Q9UMY1 257 aaKnown RBP23.51■■□□□ 1.35
COPS7A-208ENST00000538410 MRPL11Q9Y3B7 192 aaKnown RBP23.51■■□□□ 1.35
COPS7A-208ENST00000538410 PTMSP20962 102 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 NASPP49321 788 aaPredicted RBP23.51■■□□□ 1.35
COPS7A-208ENST00000538410 KIF22Q14807 665 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 ANO1Q5XXA6 986 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 CPXCR1Q8N123 301 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 LEO1Q8WVC0 666 aaPredicted RBP23.51■■□□□ 1.35
COPS7A-208ENST00000538410 RAVER2Q9HCJ3 691 aaKnown RBP23.51■■□□□ 1.35
COPS7A-208ENST00000538410 PTPN22Q9Y2R2 807 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 CLIC4Q9Y696 253 aa23.51■■□□□ 1.35
COPS7A-208ENST00000538410 OPLAHO14841 1288 aa23.5■■□□□ 1.35
COPS7A-208ENST00000538410 OAZ1P54368 228 aa23.5■■□□□ 1.35
COPS7A-208ENST00000538410 CAP1Q01518 475 aa23.5■■□□□ 1.35
COPS7A-208ENST00000538410 PABPC4Q13310 644 aaKnown RBP eCLIP23.5■■□□□ 1.355e-9■□□□□ 9.2
COPS7A-208ENST00000538410 JAKMIP3Q5VZ66 844 aa23.5■■□□□ 1.35
COPS7A-208ENST00000538410 C17orf99Q6UX52 265 aa23.5■■□□□ 1.35
COPS7A-208ENST00000538410 PARK7Q99497 189 aaKnown RBP23.5■■□□□ 1.35
COPS7A-208ENST00000538410 TMEM260Q9NX78 707 aa23.5■■□□□ 1.35
COPS7A-208ENST00000538410 CPA4Q9UI42 421 aa23.5■■□□□ 1.35
COPS7A-208ENST00000538410 RCOR1Q9UKL0 485 aa23.5■■□□□ 1.35
COPS7A-208ENST00000538410 ELP1O95163 1332 aa23.5■■□□□ 1.35
COPS7A-208ENST00000538410 UBE2SQ16763 222 aa23.49■■□□□ 1.35
COPS7A-208ENST00000538410 TEX2Q8IWB9 1127 aa23.49■■□□□ 1.35
COPS7A-208ENST00000538410 MEIS2O14770 477 aa23.48■■□□□ 1.35
COPS7A-208ENST00000538410 YEATS4O95619 227 aa23.48■■□□□ 1.35
COPS7A-208ENST00000538410 TRAPPC10P48553 1259 aa23.48■■□□□ 1.35
COPS7A-208ENST00000538410 SOX10P56693 466 aa23.48■■□□□ 1.35
COPS7A-208ENST00000538410 IRX3P78415 501 aaPredicted RBP23.48■■□□□ 1.35
COPS7A-208ENST00000538410 LACTBP83111 547 aaPredicted RBP23.48■■□□□ 1.35
COPS7A-208ENST00000538410 NONOQ15233 471 aaKnown RBP eCLIP23.48■■□□□ 1.35
COPS7A-208ENST00000538410 SF3A1Q15459 793 aaKnown RBP23.48■■□□□ 1.35
COPS7A-208ENST00000538410 ASCC2Q9H1I8 757 aaPredicted RBP23.48■■□□□ 1.35
COPS7A-208ENST00000538410 ATP2A1O14983 1001 aa23.48■■□□□ 1.35
COPS7A-208ENST00000538410 NBR1Q14596 966 aa23.48■■□□□ 1.35
COPS7A-208ENST00000538410 USP17L6PQ6QN14 398 aa23.48■■□□□ 1.35
COPS7A-208ENST00000538410 LINC00301Q8NCQ3 95 aa23.48■■□□□ 1.35
COPS7A-208ENST00000538410 P2RX7Q99572 595 aaKnown RBP23.48■■□□□ 1.35
COPS7A-208ENST00000538410 ZNF214Q9UL59 606 aaPredicted RBP23.48■■□□□ 1.35
COPS7A-208ENST00000538410 SLC45A1Q9Y2W3 748 aa23.48■■□□□ 1.35
COPS7A-208ENST00000538410 PIK3CDO00329 1044 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 CYP2C8P10632 490 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 ALAS1P13196 640 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 ATP2B1P20020 1258 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 MLLT1Q03111 559 aaPredicted RBP23.47■■□□□ 1.35
COPS7A-208ENST00000538410 TMEM132BQ14DG7 1078 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 STK38Q15208 465 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 INF2Q27J81 1249 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 MCTP2Q6DN12 878 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 LBX2Q6XYB7 198 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 PCDHB6Q9Y5E3 794 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 ADGRA2Q96PE1 1338 aa23.47■■□□□ 1.35
COPS7A-208ENST00000538410 ZSWIM8A7E2V4 1837 aa23.46■■□□□ 1.35
COPS7A-208ENST00000538410 OSBPP22059 807 aa23.46■■□□□ 1.35
COPS7A-208ENST00000538410 SLC39A14Q15043 492 aa23.46■■□□□ 1.35
COPS7A-208ENST00000538410 TTC38Q5R3I4 469 aa23.46■■□□□ 1.35
COPS7A-208ENST00000538410 MB21D1Q8N884 522 aa23.46■■□□□ 1.35
COPS7A-208ENST00000538410 HERVK_113P62684 666 aa23.45■■□□□ 1.34
COPS7A-208ENST00000538410 AP3B2Q13367 1082 aa23.45■■□□□ 1.34
COPS7A-208ENST00000538410 PTPAQ15257 358 aa23.45■■□□□ 1.34
COPS7A-208ENST00000538410 TBCKQ8TEA7 893 aa23.45■■□□□ 1.34
COPS7A-208ENST00000538410 CLEC4DQ8WXI8 215 aa23.45■■□□□ 1.34
COPS7A-208ENST00000538410 ARHGAP39Q9C0H5 1083 aa23.45■■□□□ 1.34
COPS7A-208ENST00000538410 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.45■■□□□ 1.34
COPS7A-208ENST00000538410 WNT7AO00755 349 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 GADD45BO75293 160 aaPredicted RBP23.44■■□□□ 1.34
COPS7A-208ENST00000538410 CFBP00751 764 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 SNRNP48Q6IEG0 339 aaKnown RBP23.44■■□□□ 1.34
COPS7A-208ENST00000538410 POTEEQ6S8J3 1075 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 KCNG4Q8TDN1 519 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 PGBD1Q96JS3 809 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 TEX13BQ9BXU2 312 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 GCOM1H8Y6P7 765 aaPredicted RBP23.44■■□□□ 1.34
COPS7A-208ENST00000538410 SPTLC2O15270 562 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 FOSP01100 380 aaPredicted RBP23.44■■□□□ 1.34
COPS7A-208ENST00000538410 GNRH1P01148 92 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 POLR2MP0CAP2 368 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 TBC1D5Q92609 795 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 TRERF1Q96PN7 1200 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms