RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 IFIT3O14879 490 aaKnown RBP17.32■□□□□ 0.36
CHFR-213ENST00000536843 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
CHFR-213ENST00000536843 MIGA1Q8NAN2 632 aa17.32■□□□□ 0.36
CHFR-213ENST00000536843 SLC26A6Q9BXS9 759 aa17.32■□□□□ 0.36
CHFR-213ENST00000536843 TSGA10Q9BZW7 698 aa17.32■□□□□ 0.36
CHFR-213ENST00000536843 RTL9Q8NET4 1388 aa17.32■□□□□ 0.36
CHFR-213ENST00000536843 MYH14Q7Z406 1995 aaKnown RBP17.31■□□□□ 0.36
CHFR-213ENST00000536843 HMGB1P1B2RPK0 211 aaPredicted RBP17.31■□□□□ 0.36
CHFR-213ENST00000536843 UBE2Q2LH0YL09 131 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 VAV2P52735 878 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 SARNPP82979 210 aaKnown RBP17.31■□□□□ 0.36
CHFR-213ENST00000536843 SLC7A5Q01650 507 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 PAK1Q13153 545 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 GLE1Q53GS7 698 aaKnown RBP17.31■□□□□ 0.36
CHFR-213ENST00000536843 AKNAD1Q5T1N1 836 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 MB21D1Q8N884 522 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 TRIM58Q8NG06 486 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 ATP6V1G3Q96LB4 118 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 LRP2BPQ9P2M1 347 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 IPO7O95373 1038 aaKnown RBP17.31■□□□□ 0.36
CHFR-213ENST00000536843 XRCC4Q13426 336 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 ANKRD20A8PQ5CZ79 823 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 RRP12Q5JTH9 1297 aaKnown RBP17.31■□□□□ 0.36
CHFR-213ENST00000536843 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 OSBPL7Q9BZF2 842 aa17.31■□□□□ 0.36
CHFR-213ENST00000536843 WTIPA6NIX2 430 aaPredicted RBP17.3■□□□□ 0.36
CHFR-213ENST00000536843 LGALS16A8MUM7 142 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 ECM2O94769 699 aaPredicted RBP17.3■□□□□ 0.36
CHFR-213ENST00000536843 IFNAR1P17181 557 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 INHBEP58166 350 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 ITGB3BPQ13352 177 aaPredicted RBP17.3■□□□□ 0.36
CHFR-213ENST00000536843 LACTB2Q53H82 288 aaPredicted RBP17.3■□□□□ 0.36
CHFR-213ENST00000536843 MFSD6Q6ZSS7 791 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 EPSTI1Q96J88 318 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 CCDC43Q96MW1 224 aaKnown RBP17.3■□□□□ 0.36
CHFR-213ENST00000536843 AFF2P51816 1311 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 E7EVH7 732 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 DNM1LO00429 736 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 LIFRP42702 1097 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 CCNHP51946 323 aaPredicted RBP17.3■□□□□ 0.36
CHFR-213ENST00000536843 ICA1Q05084 483 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 PPARAQ07869 468 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 BIRC2Q13490 618 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 ERFEQ4G0M1 354 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 PIK3R5Q8WYR1 880 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 HOOK2Q96ED9 719 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 SCLT1Q96NL6 688 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 HAUS2Q9NVX0 235 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 SLC12A7Q9Y666 1083 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 COL4A1P02462 1669 aa17.3■□□□□ 0.36
CHFR-213ENST00000536843 NID2Q14112 1375 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 PNPLA7Q6ZV29 1317 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 MGRN1O60291 552 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 COBLO75128 1261 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 TCP1P17987 556 aaKnown RBP17.29■□□□□ 0.36
CHFR-213ENST00000536843 GNAT2P19087 354 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 KIF5AQ12840 1032 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 RRAGBQ5VZM2 374 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 ZNF507Q8TCN5 953 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 P3H4Q92791 437 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 ZKSCAN3Q9BRR0 538 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 NACAP1Q9BZK3 213 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 KRT23Q9C075 422 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 CNNM2Q9H8M5 875 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 BATF3Q9NR55 127 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 KCNJ14Q9UNX9 436 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 DUSP10Q9Y6W6 482 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 MACROD2A1Z1Q3 448 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 IBSPP21815 317 aaPredicted RBP17.29■□□□□ 0.36
CHFR-213ENST00000536843 CYP7A1P22680 504 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 ARMC2Q8NEN0 867 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 ZNF483Q8TF39 744 aaPredicted RBP17.29■□□□□ 0.36
CHFR-213ENST00000536843 NELFBQ8WX92 580 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 OSBPL9Q96SU4 736 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 NHEJ1Q9H9Q4 299 aaPredicted RBP17.29■□□□□ 0.36
CHFR-213ENST00000536843 GDF3Q9NR23 364 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 ZNF652Q9Y2D9 606 aa17.29■□□□□ 0.36
CHFR-213ENST00000536843 TACC1O75410 805 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 GBP2P32456 591 aaPredicted RBP17.28■□□□□ 0.36
CHFR-213ENST00000536843 GYG1P46976 350 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 KCNQ4P56696 695 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 NAA25Q14CX7 972 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 C8orf74Q6P047 294 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 ADGRA1Q86SQ6 560 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 IFT20Q8IY31 132 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 ARFGAP2Q8N6H7 521 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 SYMPKQ92797 1274 aaKnown RBP17.28■□□□□ 0.36
CHFR-213ENST00000536843 POLD4Q9HCU8 107 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 HYOU1Q9Y4L1 999 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 RREB1Q92766 1687 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 DOCK2Q92608 1830 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 ANKRD33BA6NCL7 494 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 GUCY1A2P33402 732 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 PAK2Q13177 524 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 NR5A1Q13285 461 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 E2F5Q15329 346 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 SPRED3Q2MJR0 410 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 SMIM5Q71RC9 77 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 IRF2BP1Q8IU81 584 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms