RNA–Protein interactions for RNA: ENST00000536582.5

PAAF1-208, Transcript of proteasomal ATPase associated factor 1, human

TSL 2

Gene PAAF1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAAF1-208	ENST00000536582	PARK7	Q99497	189 aa	Known RBP	11.16	□□□□□ -0.62
PAAF1-208	ENST00000536582	SLC38A10	Q9HBR0	1119 aa		11.16	□□□□□ -0.62
PAAF1-208	ENST00000536582	TXNRD2	Q9NNW7	524 aa		11.16	□□□□□ -0.62
PAAF1-208	ENST00000536582	VPS54	Q9P1Q0	977 aa		11.16	□□□□□ -0.62
PAAF1-208	ENST00000536582	RBPJL	Q9UBG7	517 aa		11.16	□□□□□ -0.62
PAAF1-208	ENST00000536582	CCPG1	Q9ULG6	757 aa		11.16	□□□□□ -0.62
PAAF1-208	ENST00000536582	ADAMTS5	Q9UNA0	930 aa		11.16	□□□□□ -0.62
PAAF1-208	ENST00000536582	SLC45A1	Q9Y2W3	748 aa		11.16	□□□□□ -0.62
PAAF1-208	ENST00000536582	PCDHA1	Q9Y5I3	950 aa		11.16	□□□□□ -0.62
PAAF1-208	ENST00000536582	ZNF536	O15090	1300 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	MYPN	Q86TC9	1320 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	STK36	Q9NRP7	1315 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	CNMD	O75829	334 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	TBC1D8	O95759	1140 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	ICAM1	P05362	532 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	MAP2K2	P36507	400 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	STAT3	P40763	770 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	NAPA	P54920	295 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	CRHR2	Q13324	411 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582		Q3C1V9	767 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	LARP1B	Q659C4	914 aa	Known RBP	11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	SNRNP48	Q6IEG0	339 aa	Known RBP	11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	TYW1B	Q6NUM6	668 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	LBX2	Q6XYB7	198 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	REPS2	Q8NFH8	660 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	RNF166	Q96A37	237 aa	Predicted RBP	11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	SHISA4	Q96DD7	197 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	AMN	Q9BXJ7	453 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	R3HDML	Q9H3Y0	253 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	KCNJ14	Q9UNX9	436 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	RIPK3	Q9Y572	518 aa		11.15	□□□□□ -0.62
PAAF1-208	ENST00000536582	STXBP3	O00186	592 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	TRPA1	O75762	1119 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	TRIM29	Q14134	588 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	WDR78	Q5VTH9	848 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	NCAPG2	Q86XI2	1143 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	WASF1	Q92558	559 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	C8orf76	Q96K31	380 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	EPAS1	Q99814	870 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	SPATC1L	Q9H0A9	340 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	ZFYVE28	Q9HCC9	887 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	RNF186	Q9NXI6	227 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	ZNF214	Q9UL59	606 aa	Predicted RBP	11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582	RABGAP1	Q9Y3P9	1069 aa		11.14	□□□□□ -0.63
PAAF1-208	ENST00000536582		A0A0G2JMZ2	1700 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	VPS37C	A5D8V6	355 aa	Predicted RBP	11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	SMCO2	A6NFE2	343 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582		H3BQV1	296 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	ADAMTS3	O15072	1205 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	HR	O43593	1189 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	FDX1	P10109	184 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	GCLC	P48506	637 aa	Predicted RBP	11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	NLRP5	P59047	1200 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	ERVK-9	P63128	1117 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	ERVK-24	P63145	666 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	MUM1L1	Q5H9M0	696 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	IFFO2	Q5TF58	517 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	KRT40	Q6A162	431 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	MB21D1	Q8N884	522 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	GPRC5A	Q8NFJ5	357 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	TBC1D5	Q92609	795 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	TRERF1	Q96PN7	1200 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	TEX13B	Q9BXU2	312 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	SLC4A5	Q9BY07	1137 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	ZCCHC17	Q9NP64	241 aa	Known RBP	11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	RNF146	Q9NTX7	359 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	BARHL2	Q9NY43	387 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	RBM27	Q9P2N5	1060 aa	Known RBP	11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	KIF3A	Q9Y496	699 aa		11.13	□□□□□ -0.63
PAAF1-208	ENST00000536582	NFIB	O00712	420 aa		11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	CA12	O43570	354 aa		11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	ALDH1A1	P00352	501 aa		11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	ERCC3	P19447	782 aa		11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	SYT1	P21579	422 aa		11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	MCTP1	Q6DN14	999 aa		11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	CCAR1	Q8IX12	1150 aa	Known RBP	11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	PORCN	Q9H237	461 aa		11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	CWC22	Q9HCG8	908 aa	Known RBP	11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	TSKS	Q9UJT2	592 aa		11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	VPS9D1	Q9Y2B5	631 aa		11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	MRPL11	Q9Y3B7	192 aa	Known RBP	11.12	□□□□□ -0.63
PAAF1-208	ENST00000536582	ABCB11	O95342	1321 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	ADGRA2	Q96PE1	1338 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	ATP2A1	O14983	1001 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	TLR2	O60603	784 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	CFB	P00751	764 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	XBP1	P17861	261 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	HOXA13	P31271	388 aa	Predicted RBP	11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	ADCY7	P51828	1080 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	OAZ1	P54368	228 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	PKP1	Q13835	747 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	UBE2S	Q16763	222 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	USP17L6P	Q6QN14	398 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	C17orf99	Q6UX52	265 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	NSMF	Q6X4W1	530 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	RIOX2	Q8IUF8	465 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	DNAJC5G	Q8N7S2	189 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms