RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 BADQ92934 168 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 UPF3AQ9H1J1 476 aaKnown RBP12.18□□□□□ -0.46
CAPN1-225ENST00000533704 VTA1Q9NP79 307 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 ABCB11O95342 1321 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 DCDC2CA8MYV0 355 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 CST5P28325 142 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-225ENST00000533704 WTAPQ15007 396 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 SART3Q15020 963 aaKnown RBP12.17□□□□□ -0.46
CAPN1-225ENST00000533704 FSCN1Q16658 493 aaKnown RBP12.17□□□□□ -0.46
CAPN1-225ENST00000533704 TMEM67Q5HYA8 995 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 C1orf53Q5VUE5 145 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 IQSEC1Q6DN90 963 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 CCSAPQ6IQ19 270 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-225ENST00000533704 TAPT1Q6NXT6 567 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 STOX1Q6ZVD7 989 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 FBXO11Q86XK2 927 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 MPHOSPH6Q99547 160 aaKnown RBP12.17□□□□□ -0.46
CAPN1-225ENST00000533704 JMJD4Q9H9V9 463 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 SENP2Q9HC62 589 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 TMEM39AQ9NV64 488 aa12.17□□□□□ -0.46
CAPN1-225ENST00000533704 TRIM43BA6NCK2 446 aa12.16□□□□□ -0.46
CAPN1-225ENST00000533704 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
CAPN1-225ENST00000533704 RAG1P15918 1043 aa12.16□□□□□ -0.46
CAPN1-225ENST00000533704 CXCL17Q6UXB2 119 aa12.16□□□□□ -0.46
CAPN1-225ENST00000533704 HOMER1Q86YM7 354 aa12.16□□□□□ -0.46
CAPN1-225ENST00000533704 TBC1D5Q92609 795 aa12.16□□□□□ -0.46
CAPN1-225ENST00000533704 MAP4K1Q92918 833 aa12.16□□□□□ -0.46
CAPN1-225ENST00000533704 TRIM43Q96BQ3 446 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-225ENST00000533704 ESYT1Q9BSJ8 1104 aa12.16□□□□□ -0.46
CAPN1-225ENST00000533704 WDR11Q9BZH6 1224 aa12.16□□□□□ -0.46
CAPN1-225ENST00000533704 ANO2Q9NQ90 1003 aa12.16□□□□□ -0.46
CAPN1-225ENST00000533704 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
CAPN1-225ENST00000533704 MRPL11Q9Y3B7 192 aaKnown RBP12.16□□□□□ -0.46
CAPN1-225ENST00000533704 ELP1O95163 1332 aa12.15□□□□□ -0.46
CAPN1-225ENST00000533704 A0A0U1RQG5 324 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-225ENST00000533704 B4DLN1 442 aa12.15□□□□□ -0.46
CAPN1-225ENST00000533704 CTAGE5O15320 804 aa12.15□□□□□ -0.46
CAPN1-225ENST00000533704 ZEB2O60315 1214 aa12.15□□□□□ -0.46
CAPN1-225ENST00000533704 MRPL12P52815 198 aaKnown RBP12.15□□□□□ -0.46
CAPN1-225ENST00000533704 GRM4Q14833 912 aa12.15□□□□□ -0.46
CAPN1-225ENST00000533704 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
CAPN1-225ENST00000533704 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
CAPN1-225ENST00000533704 PIBF1Q8WXW3 757 aa12.15□□□□□ -0.46
CAPN1-225ENST00000533704 MAD2L2Q9UI95 211 aa12.15□□□□□ -0.46
CAPN1-225ENST00000533704 MROH7Q68CQ1 1323 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 LOC102724159A0A0B4J2E5 919 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 PALM3A6NDB9 673 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-225ENST00000533704 ARVCFO00192 962 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 CFBP00751 764 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 MYL3P08590 195 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 ITGB8P26012 769 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 ANTXR2P58335 489 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 FAAP100Q0VG06 881 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 PPP2R5BQ15173 497 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 PWP2Q15269 919 aaKnown RBP12.14□□□□□ -0.47
CAPN1-225ENST00000533704 LRIT3Q3SXY7 679 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 DUSP28Q4G0W2 176 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 CASC1Q6TDU7 716 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 CATIPQ7Z7H3 387 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 MB21D2Q8IYB1 491 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-225ENST00000533704 DNERQ8NFT8 737 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 OR6J1Q8NGC5 347 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 SYTL5Q8TDW5 730 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-225ENST00000533704 CCDC136Q96JN2 1154 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 TAAR1Q96RJ0 339 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 AMNQ9BXJ7 453 aa12.14□□□□□ -0.47
CAPN1-225ENST00000533704 LSG1Q9H089 658 aaKnown RBP12.14□□□□□ -0.47
CAPN1-225ENST00000533704 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-225ENST00000533704 SLC27A2O14975 620 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 KIAA0355O15063 1070 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
CAPN1-225ENST00000533704 EIF2AK2P19525 551 aaKnown RBP12.13□□□□□ -0.47
CAPN1-225ENST00000533704 PSMC6P62333 389 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 SHHQ15465 462 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 BMP2KLQ5H9B9 411 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 C9orf50Q5SZB4 431 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 NFXL1Q6ZNB6 911 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 SEPT14Q6ZU15 432 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 Q7L0L9 218 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 SCFD2Q8WU76 684 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 COPS5Q92905 334 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 TOX2Q96NM4 488 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 PIGSQ96S52 555 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 RMDN3Q96TC7 470 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 MYL10Q9BUA6 226 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 PPP1R12CQ9BZL4 782 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 COL20A1Q9P218 1284 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 Q9Y3F1 56 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 PCDHA1Q9Y5I3 950 aa12.13□□□□□ -0.47
CAPN1-225ENST00000533704 ZBTB5O15062 677 aa12.12□□□□□ -0.47
CAPN1-225ENST00000533704 PRC1O43663 620 aa12.12□□□□□ -0.47
CAPN1-225ENST00000533704 PPP1R11O60927 126 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-225ENST00000533704 CABYRO75952 493 aa12.12□□□□□ -0.47
CAPN1-225ENST00000533704 TXNP10599 105 aaKnown RBP12.12□□□□□ -0.47
CAPN1-225ENST00000533704 MCM5P33992 734 aa12.12□□□□□ -0.47
CAPN1-225ENST00000533704 CDK7P50613 346 aa12.12□□□□□ -0.47
CAPN1-225ENST00000533704 CHMP4BP1P59074 171 aa12.12□□□□□ -0.47
CAPN1-225ENST00000533704 FPGSQ05932 587 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms