RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 ZWINTO95229 277 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 CCDC121Q6ZUS5 278 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 ACCSQ96QU6 501 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 MTIF3Q9H2K0 278 aaKnown RBP11.77□□□□□ -0.53
COLCA1-203ENST00000532918 MAGEA1P43355 309 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 SLC12A2P55011 1212 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 KARSQ15046 597 aaKnown RBP11.77□□□□□ -0.53
COLCA1-203ENST00000532918 RNF207Q6ZRF8 634 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 ANKS4BQ8N8V4 417 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 SECISBP2LQ93073 1101 aaKnown RBP11.77□□□□□ -0.53
COLCA1-203ENST00000532918 CEP170P1Q96L14 293 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 KMT5AQ9NQR1 393 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
COLCA1-203ENST00000532918 PIK3CAP42336 1068 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 Q3C1V9 767 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 FAM26FQ5R3K3 315 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 CCDC89Q8N998 374 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 FTOQ9C0B1 505 aaKnown RBP eCLIP11.76□□□□□ -0.53
COLCA1-203ENST00000532918 TMEM206Q9H813 350 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 NKIRAS1Q9NYS0 192 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 SLC8A2Q9UPR5 921 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 ZHX2Q9Y6X8 837 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 ANXA13P27216 316 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 PLCB4Q15147 1175 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 ADALQ6DHV7 355 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 SELENOSQ9BQE4 189 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 RAB20Q9NX57 234 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 TTLL3Q9Y4R7 772 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 CDK8P49336 464 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 C10orf67Q8IYJ2 551 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 IFT81Q8WYA0 676 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 STAP2Q9UGK3 403 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 SERTAD1Q9UHV2 236 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 IFRD2Q12894 506 aaPredicted RBP11.76□□□□□ -0.53
COLCA1-203ENST00000532918 RSRC2Q7L4I2 434 aaKnown RBP11.76□□□□□ -0.53
COLCA1-203ENST00000532918 TRIML1Q8N9V2 468 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 MICAL1Q8TDZ2 1067 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 SEC62Q99442 399 aaKnown RBP11.76□□□□□ -0.53
COLCA1-203ENST00000532918 BLZF1Q9H2G9 400 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 HACL1Q9UJ83 578 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
COLCA1-203ENST00000532918 PNMA6FA0A0J9YX94 578 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 PSDA5PKW4 1024 aaPredicted RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 M0R2C6 588 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 DLATP10515 647 aaKnown RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 FANCCQ00597 558 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 MYO1EQ12965 1108 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 STXBP2Q15833 593 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 UAP1Q16222 522 aaPredicted RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 CDC37Q16543 378 aaPredicted RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 ZNF449Q6P9G9 518 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 ZSWIM6Q9HCJ5 1215 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 TAB2Q9NYJ8 693 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 SUGT1Q9Y2Z0 365 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 CAPN2P17655 700 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 LRMPQ12912 555 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 TBC1D9BQ66K14 1250 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 ATRIPQ8WXE1 791 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 LSM14BQ9BX40 385 aaKnown RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 NFE2L3Q9Y4A8 694 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 USP17L10C9JJH3 530 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 JAK2O60674 1132 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 CYP19A1P11511 503 aaPredicted RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 ALCAMQ13740 583 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 R3HDM1Q15032 1099 aaKnown RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 CMTR1Q8N1G2 835 aaKnown RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 CEP120Q8N960 986 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 FOXP1Q9H334 677 aaPredicted RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 PFDN4Q9NQP4 134 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 JAK3P52333 1124 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 DIXDC1Q155Q3 683 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
COLCA1-203ENST00000532918 LCORLQ8N3X6 602 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 CCDC110Q8TBZ0 833 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 KIAA1024Q9UPX6 916 aa11.75□□□□□ -0.53
COLCA1-203ENST00000532918 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.74□□□□□ -0.53
COLCA1-203ENST00000532918 MFAP3P55082 362 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 SCYL2Q6P3W7 929 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 PDXDC2PQ6P474 469 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 KCNK9Q9NPC2 374 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 PPANQ9NQ55 473 aaKnown RBP11.74□□□□□ -0.53
COLCA1-203ENST00000532918 MYO1AQ9UBC5 1043 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 ADGRB3O60242 1522 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 RNF8O76064 485 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 CLCN1P35523 988 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 CYP4A11Q02928 519 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 AP3B2Q13367 1082 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 CCDC51Q96ER9 411 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 PIGSQ96S52 555 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 NAPGQ99747 312 aaPredicted RBP11.74□□□□□ -0.53
COLCA1-203ENST00000532918 ZNRF3Q9ULT6 936 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 IGSF3O75054 1194 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
COLCA1-203ENST00000532918 GH2P01242 217 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 MAP7D3Q8IWC1 876 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 SMAP1Q8IYB5 467 aaPredicted RBP11.74□□□□□ -0.53
COLCA1-203ENST00000532918 ELMOD1Q8N336 334 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 IMPACTQ9P2X3 320 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms