RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 KCNH3Q9ULD8 1083 aa12.91□□□□□ -0.34
CSRP1-215ENST00000532313 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.91□□□□□ -0.34
CSRP1-215ENST00000532313 TMEM88BA6NKF7 163 aa12.91□□□□□ -0.34
CSRP1-215ENST00000532313 INO80B-WBP1J3KQ70 363 aa12.91□□□□□ -0.34
CSRP1-215ENST00000532313 TMEM191BP0C7N4 346 aa12.91□□□□□ -0.34
CSRP1-215ENST00000532313 SRGAP2BP0DMP2 458 aa12.91□□□□□ -0.34
CSRP1-215ENST00000532313 PAFAH1B1P43034 410 aa12.91□□□□□ -0.34
CSRP1-215ENST00000532313 MAEAQ7L5Y9 396 aa12.91□□□□□ -0.34
CSRP1-215ENST00000532313 PLEKHH3Q7Z736 793 aa12.91□□□□□ -0.34
CSRP1-215ENST00000532313 EXOC4Q96A65 974 aa12.91□□□□□ -0.34
CSRP1-215ENST00000532313 GLT1D1Q96MS3 346 aa12.91□□□□□ -0.34
CSRP1-215ENST00000532313 FOXP1Q9H334 677 aaPredicted RBP12.91□□□□□ -0.34
CSRP1-215ENST00000532313 GOLGA6L10A6NI86 522 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 KIF5CO60282 957 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 DCAF17Q5H9S7 520 aaPredicted RBP12.9□□□□□ -0.34
CSRP1-215ENST00000532313 SOCS4Q8WXH5 440 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
CSRP1-215ENST00000532313 KCNJ14Q9UNX9 436 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 WDR64B1ANS9 1081 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 SH2B2O14492 632 aaPredicted RBP12.9□□□□□ -0.34
CSRP1-215ENST00000532313 IFNAR1P17181 557 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 TNNI1P19237 187 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 DDR1Q08345 913 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.34
CSRP1-215ENST00000532313 FAM81BQ96LP2 452 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 TMEM47Q9BQJ4 181 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 ANO3Q9BYT9 981 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 MACROD2A1Z1Q3 448 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 DCDC2CA8MYV0 355 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 PTPREP23469 700 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 ZNF165P49910 485 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 MTMR1Q13613 665 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 PCSK9Q8NBP7 692 aaKnown RBP12.9□□□□□ -0.34
CSRP1-215ENST00000532313 MCPH1Q8NEM0 835 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 NSMCE1Q8WV22 266 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 CTNNBL1Q8WYA6 563 aaPredicted RBP12.9□□□□□ -0.34
CSRP1-215ENST00000532313 PLIN2Q99541 437 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 PARP2Q9UGN5 583 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 KPNA6O60684 536 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 CPT1AP50416 773 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 IQCDQ96DY2 449 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 POLLQ9UGP5 575 aa12.9□□□□□ -0.34
CSRP1-215ENST00000532313 DENND3A2RUS2 1198 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 K7ENM7 598 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 GH1P01241 217 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 BCRP11274 1271 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 IL1R1P14778 569 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 PHKA2P46019 1235 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 LMAN1P49257 510 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 OR6J1Q8NGC5 347 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 IPO4Q8TEX9 1081 aaKnown RBP12.89□□□□□ -0.35
CSRP1-215ENST00000532313 CYP2B6P20813 491 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 FAM160A1Q05DH4 1040 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 ELMOD1Q8N336 334 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
CSRP1-215ENST00000532313 TOPORSQ9NS56 1045 aaPredicted RBP12.89□□□□□ -0.35
CSRP1-215ENST00000532313 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 TYW5A2RUC4 315 aaKnown RBP12.89□□□□□ -0.35
CSRP1-215ENST00000532313 TNFAIP2Q03169 654 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 PDIA6Q15084 440 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 CEP95Q96GE4 821 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 ZSWIM4Q9H7M6 989 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 GPRC5DQ9NZD1 345 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 ROBO1Q9Y6N7 1651 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 FAM205AQ6ZU69 1335 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 KRT5P13647 590 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 CTR9Q6PD62 1173 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 ATG9AQ7Z3C6 839 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 C2orf40Q9H1Z8 148 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 HESX1Q9UBX0 185 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 COMMD10Q9Y6G5 202 aa12.89□□□□□ -0.35
CSRP1-215ENST00000532313 TM4SF1P30408 202 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 Q3C1V9 767 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 CATSPER4Q7RTX7 472 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 ZNF142P52746 1687 aaPredicted RBP12.88□□□□□ -0.35
CSRP1-215ENST00000532313 SOCS7O14512 581 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
CSRP1-215ENST00000532313 STAM2O75886 525 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 GAS8O95995 478 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 SYT1P21579 422 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 SKIV2LQ15477 1246 aaKnown RBP12.88□□□□□ -0.35
CSRP1-215ENST00000532313 ZBTB33Q86T24 672 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 NAA15Q9BXJ9 866 aaKnown RBP12.88□□□□□ -0.35
CSRP1-215ENST00000532313 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 PTH1RQ03431 593 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 PPATQ06203 517 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 KYAT1Q16773 422 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 RGMBQ6NW40 437 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 TEX2Q8IWB9 1127 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 NKX2-3Q8TAU0 364 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.88□□□□□ -0.35
CSRP1-215ENST00000532313 FAM20AQ96MK3 541 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 MRIQ9BWK5 157 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 TMEM39BQ9GZU3 492 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
CSRP1-215ENST00000532313 GOLGA6L10A0A0M3HER8 536 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 GRM4Q14833 912 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 SLFN12LQ6IEE8 588 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms