RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 HSPD1P10809 573 aaKnown RBP18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 PDE4DQ08499 809 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 OTOP2Q7RTS6 562 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 OR6J1Q8NGC5 347 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 WDR11Q9BZH6 1224 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 LNPKQ9C0E8 428 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 PRDM12Q9H4Q4 367 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 GPHNQ9NQX3 736 aaPredicted RBP18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 PDHBP11177 359 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 CPT1AP50416 773 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 MFAP1P55081 439 aaKnown RBP18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 PPP2R5BQ15173 497 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 DUSP28Q4G0W2 176 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 BRDTQ58F21 947 aaPredicted RBP18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 FAM47CQ5HY64 1035 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 TMEM63BQ5T3F8 832 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 BTNL9Q6UXG8 535 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 RNF207Q6ZRF8 634 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 MFSD6Q6ZSS7 791 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 TBC1D10CQ8IV04 446 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 USP38Q8NB14 1042 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 SLC43A3Q8NBI5 491 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 NOC4LQ9BVI4 516 aaKnown RBP18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 SEZ6LQ9BYH1 1024 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 POLR3EQ9NVU0 708 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 PNMA2Q9UL42 364 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 Q9Y3F1 56 aa18.59■□□□□ 0.57
CHMP4A-204ENST00000530996 NOVP48745 357 aa18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 HDAC1Q13547 482 aaPredicted RBP18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 USH1GQ495M9 461 aa18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 AKNAD1Q5T1N1 836 aa18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 RASIP1Q5U651 963 aa18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 MORC4Q8TE76 937 aa18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 HERVK_113Q902F9 699 aa18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 ALDH8A1Q9H2A2 487 aaPredicted RBP18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 NKX2-4Q9H2Z4 354 aa18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 RNF41Q9H4P4 317 aaPredicted RBP18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 TCP11L1Q9NUJ3 509 aa18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 CXXC1Q9P0U4 656 aaPredicted RBP18.58■□□□□ 0.56
CHMP4A-204ENST00000530996 GRIN2DO15399 1336 aa18.57■□□□□ 0.56
CHMP4A-204ENST00000530996 NEDD4P46934 1319 aa18.57■□□□□ 0.56
CHMP4A-204ENST00000530996 FGRP09769 529 aa18.57■□□□□ 0.56
CHMP4A-204ENST00000530996 ZNF543Q08ER8 600 aa18.57■□□□□ 0.56
CHMP4A-204ENST00000530996 ESR2Q92731 530 aa18.57■□□□□ 0.56
CHMP4A-204ENST00000530996 SCLYQ96I15 445 aa18.57■□□□□ 0.56
CHMP4A-204ENST00000530996 WNT8AQ9H1J5 351 aa18.57■□□□□ 0.56
CHMP4A-204ENST00000530996 SLC28A3Q9HAS3 691 aa18.57■□□□□ 0.56
CHMP4A-204ENST00000530996 TRMT13Q9NUP7 481 aaKnown RBP18.57■□□□□ 0.56
CHMP4A-204ENST00000530996 GOLGA8HP0CJ92 632 aa18.56■□□□□ 0.56
CHMP4A-204ENST00000530996 PCP11498 1178 aaKnown RBP18.56■□□□□ 0.56
CHMP4A-204ENST00000530996 IGFBP4P22692 258 aa18.56■□□□□ 0.56
CHMP4A-204ENST00000530996 CHMP4BP1P59074 171 aa18.56■□□□□ 0.56
CHMP4A-204ENST00000530996 B4GALNT3Q6L9W6 998 aa18.56■□□□□ 0.56
CHMP4A-204ENST00000530996 SYMPKQ92797 1274 aaKnown RBP18.56■□□□□ 0.56
CHMP4A-204ENST00000530996 ZKSCAN3Q9BRR0 538 aa18.56■□□□□ 0.56
CHMP4A-204ENST00000530996 DIAPH3Q9NSV4 1193 aa18.56■□□□□ 0.56
CHMP4A-204ENST00000530996 PRUNE2Q8WUY3 3088 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 VCANP13611 3396 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 TNKSO95271 1327 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 WDR19Q8NEZ3 1342 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 LOC102724159A0A0B4J2E5 919 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 DHX16O60231 1041 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 SUPT20HL2P0C7V6 817 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 CYP2C9P11712 490 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 RPS6P62753 249 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 PURAQ00577 322 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 PWP2Q15269 919 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 GPATCH4Q5T3I0 446 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 RPUSD2Q8IZ73 545 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 SCFD2Q8WU76 684 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 CLEC4DQ8WXI8 215 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 MTG1Q9BT17 334 aaPredicted RBP18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 NOD1Q9Y239 953 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 SLC4A7Q9Y6M7 1214 aa18.55■□□□□ 0.56
CHMP4A-204ENST00000530996 B4DLN1 442 aa18.54■□□□□ 0.56
CHMP4A-204ENST00000530996 MRPL12P52815 198 aaKnown RBP18.54■□□□□ 0.56
CHMP4A-204ENST00000530996 TJAP1Q5JTD0 557 aa18.54■□□□□ 0.56
CHMP4A-204ENST00000530996 PPP2R2DQ66LE6 453 aa18.54■□□□□ 0.56
CHMP4A-204ENST00000530996 DEFB128Q7Z7B8 93 aa18.54■□□□□ 0.56
CHMP4A-204ENST00000530996 MICALL1Q8N3F8 863 aa18.54■□□□□ 0.56
CHMP4A-204ENST00000530996 TTC14Q96N46 770 aa18.54■□□□□ 0.56
CHMP4A-204ENST00000530996 KAT14Q9H8E8 782 aa18.54■□□□□ 0.56
CHMP4A-204ENST00000530996 LCTP09848 1927 aa18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 ZNF213O14771 459 aa18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 NKRFO15226 690 aaKnown RBP eCLIP18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 RABGGTBP53611 331 aa18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 CCDC85BQ15834 202 aaPredicted RBP18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 CDC37Q16543 378 aaPredicted RBP18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 IQCA1Q86XH1 822 aa18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 TICAM2Q86XR7 235 aa18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 DNERQ8NFT8 737 aa18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 PPP1R13LQ8WUF5 828 aa18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 CPVLQ9H3G5 476 aa18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 PRDM6Q9NQX0 595 aa18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 YBX2Q9Y2T7 364 aaKnown RBP18.53■□□□□ 0.56
CHMP4A-204ENST00000530996 KDM4AO75164 1064 aa18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 SNHG28P0DPA3 235 aa18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 TXNP10599 105 aaKnown RBP18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 ATP2A2P16615 1042 aaKnown RBP18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 SDSP20132 328 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms