RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 TMEM265A0A087WTH1 108 aa24.43■■□□□ 1.5
TSPAN4-219ENST00000530404 PDHBP11177 359 aa24.43■■□□□ 1.5
TSPAN4-219ENST00000530404 SLC43A3Q8NBI5 491 aa24.43■■□□□ 1.5
TSPAN4-219ENST00000530404 TIFAQ96CG3 184 aa24.43■■□□□ 1.5
TSPAN4-219ENST00000530404 VTA1Q9NP79 307 aa24.43■■□□□ 1.5
TSPAN4-219ENST00000530404 TCP11L1Q9NUJ3 509 aa24.43■■□□□ 1.5
TSPAN4-219ENST00000530404 ZMYM6O95789 1325 aa24.42■■□□□ 1.5
TSPAN4-219ENST00000530404 MORC4Q8TE76 937 aa24.42■■□□□ 1.5
TSPAN4-219ENST00000530404 ZKSCAN3Q9BRR0 538 aa24.42■■□□□ 1.5
TSPAN4-219ENST00000530404 TRPV6Q9H1D0 765 aa24.42■■□□□ 1.5
TSPAN4-219ENST00000530404 ZNF576Q9H609 170 aa24.42■■□□□ 1.5
TSPAN4-219ENST00000530404 NEDD4P46934 1319 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 TANC1Q9C0D5 1861 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 ZEB2O60315 1214 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 B4GALT4O60513 344 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 CABYRO75952 493 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 CALML3P27482 149 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 CCL23P55773 120 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 AKNAD1Q5T1N1 836 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 MFSD6Q6ZSS7 791 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 CLEC4DQ8WXI8 215 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 PBX4Q9BYU1 374 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 HIPK3Q9H422 1215 aa24.41■■□□□ 1.5
TSPAN4-219ENST00000530404 ZNF543Q08ER8 600 aa24.4■■□□□ 1.5
TSPAN4-219ENST00000530404 RASIP1Q5U651 963 aa24.4■■□□□ 1.5
TSPAN4-219ENST00000530404 PSRC1Q6PGN9 363 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-219ENST00000530404 CPVLQ9H3G5 476 aa24.4■■□□□ 1.5
TSPAN4-219ENST00000530404 IL23AQ9NPF7 189 aa24.4■■□□□ 1.5
TSPAN4-219ENST00000530404 ADD3Q9UEY8 706 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-219ENST00000530404 GOLGA8HP0CJ92 632 aa24.39■■□□□ 1.49
TSPAN4-219ENST00000530404 DUSP28Q4G0W2 176 aa24.39■■□□□ 1.49
TSPAN4-219ENST00000530404 USP38Q8NB14 1042 aa24.39■■□□□ 1.49
TSPAN4-219ENST00000530404 WDR11Q9BZH6 1224 aa24.39■■□□□ 1.49
TSPAN4-219ENST00000530404 CXXC1Q9P0U4 656 aaPredicted RBP24.39■■□□□ 1.49
TSPAN4-219ENST00000530404 Q9Y3F1 56 aa24.39■■□□□ 1.49
TSPAN4-219ENST00000530404 SDSP20132 328 aa24.38■■□□□ 1.49
TSPAN4-219ENST00000530404 RNF207Q6ZRF8 634 aa24.38■■□□□ 1.49
TSPAN4-219ENST00000530404 PPP1R13LQ8WUF5 828 aa24.38■■□□□ 1.49
TSPAN4-219ENST00000530404 NOC4LQ9BVI4 516 aaKnown RBP24.38■■□□□ 1.49
TSPAN4-219ENST00000530404 WNT8AQ9H1J5 351 aa24.38■■□□□ 1.49
TSPAN4-219ENST00000530404 TET1Q8NFU7 2136 aa24.38■■□□□ 1.49
TSPAN4-219ENST00000530404 MYL3P08590 195 aa24.37■■□□□ 1.49
TSPAN4-219ENST00000530404 USH1GQ495M9 461 aa24.37■■□□□ 1.49
TSPAN4-219ENST00000530404 OR6J1Q8NGC5 347 aa24.37■■□□□ 1.49
TSPAN4-219ENST00000530404 PTPRSQ13332 1948 aa24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 SNHG28P0DPA3 235 aa24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 RPS6P62753 249 aaKnown RBP24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 OTOP2Q7RTS6 562 aa24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 PLEKHM2Q8IWE5 1019 aa24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 SMC5Q8IY18 1101 aa24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 HERVK_113Q902F9 699 aa24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 COPS5Q92905 334 aa24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 SCLYQ96I15 445 aa24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 YTHDC1Q96MU7 727 aaKnown RBP24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 TTC14Q96N46 770 aa24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 UBA5Q9GZZ9 404 aa24.36■■□□□ 1.49
TSPAN4-219ENST00000530404 IGHDP01880 384 aa24.35■■□□□ 1.49
TSPAN4-219ENST00000530404 FGBP02675 491 aa24.35■■□□□ 1.49
TSPAN4-219ENST00000530404 CWC27Q6UX04 472 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-219ENST00000530404 ALDH8A1Q9H2A2 487 aaPredicted RBP24.35■■□□□ 1.49
TSPAN4-219ENST00000530404 PRDM12Q9H4Q4 367 aa24.35■■□□□ 1.49
TSPAN4-219ENST00000530404 TRMT13Q9NUP7 481 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-219ENST00000530404 BAZ2BQ9UIF8 2168 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-219ENST00000530404 TRANK1O15050 2925 aa24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 RBM47A0AV96 593 aaKnown RBP24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 CYP2C9P11712 490 aa24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 PURAQ00577 322 aaKnown RBP24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 PDE4DQ08499 809 aa24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 CHD1LQ86WJ1 897 aa24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 TICAM2Q86XR7 235 aa24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 PPM1EQ8WY54 764 aa24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 ESR2Q92731 530 aa24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 RWDD1Q9H446 243 aaPredicted RBP24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 RNF41Q9H4P4 317 aaPredicted RBP24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 WDR19Q8NEZ3 1342 aa24.34■■□□□ 1.49
TSPAN4-219ENST00000530404 ZNF213O14771 459 aa24.33■■□□□ 1.49
TSPAN4-219ENST00000530404 PCP11498 1178 aaKnown RBP24.33■■□□□ 1.49
TSPAN4-219ENST00000530404 MFAP1P55081 439 aaKnown RBP24.33■■□□□ 1.49
TSPAN4-219ENST00000530404 NKX2-4Q9H2Z4 354 aa24.33■■□□□ 1.49
TSPAN4-219ENST00000530404 PRDM6Q9NQX0 595 aa24.33■■□□□ 1.49
TSPAN4-219ENST00000530404 POLR3EQ9NVU0 708 aa24.33■■□□□ 1.49
TSPAN4-219ENST00000530404 LOC102724159A0A0B4J2E5 919 aa24.32■■□□□ 1.48
TSPAN4-219ENST00000530404 B4E1Z4 1266 aa24.32■■□□□ 1.48
TSPAN4-219ENST00000530404 KDM4AO75164 1064 aa24.32■■□□□ 1.48
TSPAN4-219ENST00000530404 CPT1AP50416 773 aa24.32■■□□□ 1.48
TSPAN4-219ENST00000530404 PPP2R5BQ15173 497 aa24.32■■□□□ 1.48
TSPAN4-219ENST00000530404 PWP2Q15269 919 aaKnown RBP24.32■■□□□ 1.48
TSPAN4-219ENST00000530404 TBC1D5Q92609 795 aa24.32■■□□□ 1.48
TSPAN4-219ENST00000530404 VWCEQ96DN2 955 aa24.32■■□□□ 1.48
TSPAN4-219ENST00000530404 YBX2Q9Y2T7 364 aaKnown RBP24.32■■□□□ 1.48
TSPAN4-219ENST00000530404 TNKSO95271 1327 aa24.32■■□□□ 1.48
TSPAN4-219ENST00000530404 ARIH2O95376 493 aa24.31■■□□□ 1.48
TSPAN4-219ENST00000530404 EDNRBP24530 442 aa24.31■■□□□ 1.48
TSPAN4-219ENST00000530404 RABGGTBP53611 331 aa24.31■■□□□ 1.48
TSPAN4-219ENST00000530404 CDC37Q16543 378 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-219ENST00000530404 FAM47CQ5HY64 1035 aa24.31■■□□□ 1.48
TSPAN4-219ENST00000530404 PNMA1Q8ND90 353 aa24.31■■□□□ 1.48
TSPAN4-219ENST00000530404 GAS2L1Q99501 681 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-219ENST00000530404 MTG1Q9BT17 334 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-219ENST00000530404 SEZ6LQ9BYH1 1024 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms