RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 NINJ1Q92982 152 aa4.55□□□□□ -1.68
BRCA2-203ENST00000528762 PPP1R14AQ96A00 147 aa4.55□□□□□ -1.68
BRCA2-203ENST00000528762 TCTN2Q96GX1 697 aa4.55□□□□□ -1.68
BRCA2-203ENST00000528762 FGD4Q96M96 766 aa4.55□□□□□ -1.68
BRCA2-203ENST00000528762 HDAC8Q9BY41 377 aa4.55□□□□□ -1.68
BRCA2-203ENST00000528762 CHMP4AQ9BY43 222 aa4.55□□□□□ -1.68
BRCA2-203ENST00000528762 ASCC2Q9H1I8 757 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-203ENST00000528762 METTL14Q9HCE5 456 aaKnown RBP4.55□□□□□ -1.68
BRCA2-203ENST00000528762 GCM1Q9NP62 436 aa4.55□□□□□ -1.68
BRCA2-203ENST00000528762 SUSD2Q9UGT4 822 aa4.55□□□□□ -1.68
BRCA2-203ENST00000528762 CNOT6Q9ULM6 557 aaKnown RBP4.55□□□□□ -1.68
BRCA2-203ENST00000528762 PLAAQ9Y263 795 aa4.55□□□□□ -1.68
BRCA2-203ENST00000528762 TRBV23-1A0A0A0MS06 115 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 SSU72P8A0A1W2PR75 194 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 B8ZZF3 427 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 NOP56O00567 594 aaKnown RBP4.54□□□□□ -1.68
BRCA2-203ENST00000528762 KCNQ2O43526 872 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 RFPL3O75679 317 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 PPM1BO75688 479 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 EPHX1P07099 455 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 SYPP08247 313 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 PI3P19957 117 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 HOXA5P20719 270 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 CD247P20963 164 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 EPHB3P54753 998 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 CTSWP56202 376 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 SLC14A2Q15849 920 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 VMACQ2NL98 169 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 FAM209AQ5JX71 171 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 NBPF12Q5TAG4 269 aaPredicted RBP4.54□□□□□ -1.68
BRCA2-203ENST00000528762 FOXB2Q5VYV0 432 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 KRT26Q7Z3Y9 468 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 AMIGO3Q86WK7 504 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 SPPL2CQ8IUH8 684 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 DHX37Q8IY37 1157 aaKnown RBP4.54□□□□□ -1.68
BRCA2-203ENST00000528762 ANKS4BQ8N8V4 417 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 LINC01599Q8WXQ3 324 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 KISS1RQ969F8 398 aaPredicted RBP4.54□□□□□ -1.68
BRCA2-203ENST00000528762 VWCEQ96DN2 955 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 C20orf173Q96LM9 149 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 HAUS7Q99871 368 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 PLCD4Q9BRC7 762 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 GBP3Q9H0R5 595 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 ZNF552Q9H707 407 aaPredicted RBP4.54□□□□□ -1.68
BRCA2-203ENST00000528762 TCFL5Q9UL49 500 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 SUGT1Q9Y2Z0 365 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 KCTD3Q9Y597 815 aa4.54□□□□□ -1.68
BRCA2-203ENST00000528762 NCANO14594 1321 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 TMEM82A0PJX8 343 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 PRRG2O14669 202 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 PLD2O14939 933 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 PRAMEF1O95521 474 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 CAPNS1P04632 268 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 ITGAVP06756 1048 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 PPP2R2AP63151 447 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 SRSF3P84103 164 aaKnown RBP4.53□□□□□ -1.68
BRCA2-203ENST00000528762 CHRNEQ04844 493 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 PABPC4Q13310 644 aaKnown RBP eCLIP4.53□□□□□ -1.68
BRCA2-203ENST00000528762 AUHQ13825 339 aaKnown RBP4.53□□□□□ -1.68
BRCA2-203ENST00000528762 CBX2Q14781 532 aaPredicted RBP4.53□□□□□ -1.68
BRCA2-203ENST00000528762 NR0B2Q15466 257 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 FNDC3BQ53EP0 1204 aaKnown RBP4.53□□□□□ -1.68
BRCA2-203ENST00000528762 DCAF15Q66K64 600 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 NLRX1Q86UT6 975 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 NIM1KQ8IY84 436 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 BVESQ8NE79 360 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 MAP6Q96JE9 813 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 HHIPL1Q96JK4 782 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 AARSD1Q9BTE6 412 aaKnown RBP4.53□□□□□ -1.68
BRCA2-203ENST00000528762 PRDM14Q9GZV8 571 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 MKRN2Q9H000 416 aaKnown RBP4.53□□□□□ -1.68
BRCA2-203ENST00000528762 KLHL25Q9H0H3 589 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 ZCCHC4Q9H5U6 513 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 TYW1Q9NV66 732 aaKnown RBP4.53□□□□□ -1.68
BRCA2-203ENST00000528762 DDX56Q9NY93 547 aaKnown RBP4.53□□□□□ -1.68
BRCA2-203ENST00000528762 FBXL21Q9UKT6 434 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 AKT3Q9Y243 479 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 ZNF451Q9Y4E5 1061 aa4.53□□□□□ -1.68
BRCA2-203ENST00000528762 A0A087WZG4 1122 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 TEX51A0A1B0GUA7 166 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 OR14I1A6ND48 311 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 PRODHO43272 600 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 PARNO95453 639 aaKnown RBP4.52□□□□□ -1.69
BRCA2-203ENST00000528762 MYCLP1P12525 358 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-203ENST00000528762 RNF4P78317 190 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 NBPF9Q3BBW0 867 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 TM4SF20Q53R12 229 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 NOL9Q5SY16 702 aaKnown RBP4.52□□□□□ -1.69
BRCA2-203ENST00000528762 NSMFQ6X4W1 530 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 THNSL2Q86YJ6 484 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 C7orf61Q8IZ16 206 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 SYTL5Q8TDW5 730 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-203ENST00000528762 RCC1LQ96I51 464 aaKnown RBP4.52□□□□□ -1.69
BRCA2-203ENST00000528762 EXOC2Q96KP1 924 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 FAM126AQ9BYI3 521 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-203ENST00000528762 ARHGEF4Q9NR80 690 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 WHRNQ9P202 907 aa4.52□□□□□ -1.69
BRCA2-203ENST00000528762 DIS3Q9Y2L1 958 aaKnown RBP4.52□□□□□ -1.69
BRCA2-203ENST00000528762 GPR55Q9Y2T6 319 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-203ENST00000528762 MRPS23Q9Y3D9 190 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms