RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 CDX2Q99626 313 aaPredicted RBP13.59□□□□□ -0.23
SRPRA-203ENST00000528744 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.59□□□□□ -0.231e-7■□□□□ 10.6
SRPRA-203ENST00000528744 PRUNE2Q8WUY3 3088 aa13.59□□□□□ -0.23
SRPRA-203ENST00000528744 UNC80Q8N2C7 3258 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 MCM3APO60318 1980 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 LTBP2Q14767 1821 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 GRXCR1A8MXD5 290 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 ACRP10323 421 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 CALML3P27482 149 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 RPS6P62753 249 aaKnown RBP13.58□□□□□ -0.24
SRPRA-203ENST00000528744 FSCN1Q16658 493 aaKnown RBP13.58□□□□□ -0.24
SRPRA-203ENST00000528744 TMEM240Q5SV17 173 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 TLK2Q86UE8 772 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 DGKHQ86XP1 1220 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 COPS5Q92905 334 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 PPP1R12CQ9BZL4 782 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 TRPV6Q9H1D0 765 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 TAF6LQ9Y6J9 622 aa13.58□□□□□ -0.24
SRPRA-203ENST00000528744 A0A0U1RQG5 324 aaPredicted RBP13.57□□□□□ -0.24
SRPRA-203ENST00000528744 RBM47A0AV96 593 aaKnown RBP13.57□□□□□ -0.24
SRPRA-203ENST00000528744 PTPDC1A2A3K4 754 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 CSF2RAP15509 400 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 CYP2C18P33260 490 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 SMAD3P84022 425 aaKnown RBP13.57□□□□□ -0.24
SRPRA-203ENST00000528744 FPGSQ05932 587 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 SLC35G1Q2M3R5 365 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 MFSD5Q6N075 450 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 CYB5R4Q7L1T6 521 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 ENAHQ8N8S7 591 aaPredicted RBP13.57□□□□□ -0.24
SRPRA-203ENST00000528744 ESR2Q92731 530 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 SPC25Q9HBM1 224 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 COL20A1Q9P218 1284 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 VCANP13611 3396 aa13.57□□□□□ -0.24
SRPRA-203ENST00000528744 DLL1O00548 723 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 ARIH2O95376 493 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 PCP11498 1178 aaKnown RBP13.56□□□□□ -0.24
SRPRA-203ENST00000528744 EDNRBP24530 442 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 PTH1RQ03431 593 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 ITGA7Q13683 1181 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 DUSP28Q4G0W2 176 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 RASIP1Q5U651 963 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 RNF207Q6ZRF8 634 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 ADGRF4Q8IZF3 695 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 STAG2Q8N3U4 1231 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 PNMA1Q8ND90 353 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 RNPC3Q96LT9 517 aaKnown RBP13.56□□□□□ -0.24
SRPRA-203ENST00000528744 TAAR1Q96RJ0 339 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 ZSCAN10Q96SZ4 725 aaPredicted RBP13.56□□□□□ -0.24
SRPRA-203ENST00000528744 WDR11Q9BZH6 1224 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 RNF41Q9H4P4 317 aaPredicted RBP13.56□□□□□ -0.24
SRPRA-203ENST00000528744 SENP2Q9HC62 589 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 VTA1Q9NP79 307 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 DIAPH3Q9NSV4 1193 aa13.56□□□□□ -0.24
SRPRA-203ENST00000528744 B4GALT4O60513 344 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 PBX2P40425 430 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 SEC23AQ15436 765 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 USH1GQ495M9 461 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 ZNF697Q5TEC3 545 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 MYLIPQ8WY64 445 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 AP5M1Q9H0R1 490 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 JMJD4Q9H9V9 463 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 VAT1LQ9HCJ6 419 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 CXXC1Q9P0U4 656 aaPredicted RBP13.55□□□□□ -0.24
SRPRA-203ENST00000528744 Q9Y3F1 56 aa13.55□□□□□ -0.24
SRPRA-203ENST00000528744 MFAP1P55081 439 aaKnown RBP13.54□□□□□ -0.24
SRPRA-203ENST00000528744 CCL23P55773 120 aa13.54□□□□□ -0.24
SRPRA-203ENST00000528744 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
SRPRA-203ENST00000528744 GRIN2CQ14957 1233 aa13.54□□□□□ -0.24
SRPRA-203ENST00000528744 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
SRPRA-203ENST00000528744 SYTL5Q8TDW5 730 aaPredicted RBP13.54□□□□□ -0.24
SRPRA-203ENST00000528744 WNT8AQ9H1J5 351 aa13.54□□□□□ -0.24
SRPRA-203ENST00000528744 WDR19Q8NEZ3 1342 aa13.54□□□□□ -0.24
SRPRA-203ENST00000528744 LCTP09848 1927 aa13.53□□□□□ -0.24
SRPRA-203ENST00000528744 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.53□□□□□ -0.24
SRPRA-203ENST00000528744 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.53□□□□□ -0.24
SRPRA-203ENST00000528744 OPLAHO14841 1288 aa13.53□□□□□ -0.24
SRPRA-203ENST00000528744 PPP1R11O60927 126 aaPredicted RBP13.53□□□□□ -0.24
SRPRA-203ENST00000528744 PURAQ00577 322 aaKnown RBP13.53□□□□□ -0.24
SRPRA-203ENST00000528744 CDC37Q16543 378 aaPredicted RBP13.53□□□□□ -0.24
SRPRA-203ENST00000528744 QRICH1Q2TAL8 776 aa13.53□□□□□ -0.24
SRPRA-203ENST00000528744 GPATCH4Q5T3I0 446 aaKnown RBP13.53□□□□□ -0.24
SRPRA-203ENST00000528744 RGS22Q8NE09 1264 aa13.53□□□□□ -0.24
SRPRA-203ENST00000528744 NOC4LQ9BVI4 516 aaKnown RBP13.53□□□□□ -0.24
SRPRA-203ENST00000528744 TRMT13Q9NUP7 481 aaKnown RBP13.53□□□□□ -0.24
SRPRA-203ENST00000528744 ADD3Q9UEY8 706 aaKnown RBP13.53□□□□□ -0.24
SRPRA-203ENST00000528744 TNKSO95271 1327 aa13.53□□□□□ -0.24
SRPRA-203ENST00000528744 HIP1O00291 1037 aa13.52□□□□□ -0.25
SRPRA-203ENST00000528744 CABYRO75952 493 aa13.52□□□□□ -0.25
SRPRA-203ENST00000528744 MYL3P08590 195 aa13.52□□□□□ -0.25
SRPRA-203ENST00000528744 CYP21A2P08686 494 aa13.52□□□□□ -0.25
SRPRA-203ENST00000528744 CYP2C9P11712 490 aa13.52□□□□□ -0.25
SRPRA-203ENST00000528744 CHMLP26374 656 aa13.52□□□□□ -0.25
SRPRA-203ENST00000528744 IMMTQ16891 758 aaKnown RBP13.52□□□□□ -0.25
SRPRA-203ENST00000528744 CCDC62Q6P9F0 684 aa13.52□□□□□ -0.25
SRPRA-203ENST00000528744 STOX1Q6ZVD7 989 aa13.52□□□□□ -0.25
SRPRA-203ENST00000528744 SCLYQ96I15 445 aa13.52□□□□□ -0.25
SRPRA-203ENST00000528744 ALDH8A1Q9H2A2 487 aaPredicted RBP13.52□□□□□ -0.25
SRPRA-203ENST00000528744 KAT14Q9H8E8 782 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms