RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TACR2P21452 398 aa4.86□□□□□ -1.63
CLNS1A-209ENST00000527299 ACVRL1P37023 503 aa4.86□□□□□ -1.63
CLNS1A-209ENST00000527299 GDF5P43026 501 aa4.86□□□□□ -1.63
CLNS1A-209ENST00000527299 KCNA1Q09470 495 aa4.86□□□□□ -1.63
CLNS1A-209ENST00000527299 Q8N1X5 172 aa4.86□□□□□ -1.63
CLNS1A-209ENST00000527299 ALG3Q92685 438 aa4.86□□□□□ -1.63
CLNS1A-209ENST00000527299 NOX5Q96PH1 765 aa4.86□□□□□ -1.63
CLNS1A-209ENST00000527299 SHOXO15266 292 aa4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 GLI4P10075 376 aa4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 PMLP29590 882 aa4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 CWF19L1Q69YN2 538 aaKnown RBP4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 C7orf61Q8IZ16 206 aa4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 ADAMTS17Q8TE56 1095 aa4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 CPA5Q8WXQ8 436 aa4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 DVL3Q92997 716 aaPredicted RBP4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 TSPAN17Q96FV3 270 aa4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 FAM161BQ96MY7 647 aa4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 DSCC1Q9BVC3 393 aa4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 MRIQ9BWK5 157 aa4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 DBR1Q9UK59 544 aaKnown RBP4.85□□□□□ -1.63
CLNS1A-209ENST00000527299 ANKRD33BA6NCL7 494 aa4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 MEIS3P2A8K0S8 358 aa4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 H0Y8X5 98 aa4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 TACR1P25103 407 aa4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 XPCQ01831 940 aaPredicted RBP4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 CRIP3Q6Q6R5 217 aa4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 TTLL7Q6ZT98 887 aa4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 REXO1Q8N1G1 1221 aaKnown RBP4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 CHST13Q8NET6 341 aa4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 SMARCC2Q8TAQ2 1214 aa4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 SECISBP2LQ93073 1101 aaKnown RBP4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 KBTBD4Q9NVX7 518 aa4.84□□□□□ -1.63
CLNS1A-209ENST00000527299 CRKP46108 304 aa4.83□□□□□ -1.64
CLNS1A-209ENST00000527299 CLCQ05315 142 aa4.83□□□□□ -1.64
CLNS1A-209ENST00000527299 CACNB2Q08289 660 aaPredicted RBP4.83□□□□□ -1.64
CLNS1A-209ENST00000527299 SPRED1Q7Z699 444 aa4.83□□□□□ -1.64
CLNS1A-209ENST00000527299 LINC00482Q8N8I6 264 aa4.83□□□□□ -1.64
CLNS1A-209ENST00000527299 SLC9A7Q96T83 725 aa4.83□□□□□ -1.64
CLNS1A-209ENST00000527299 SLITRK6Q9H5Y7 841 aa4.83□□□□□ -1.64
CLNS1A-209ENST00000527299 BCAS3Q9H6U6 928 aa4.83□□□□□ -1.64
CLNS1A-209ENST00000527299 SHROOM4Q9ULL8 1493 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 C9IYK1 514 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 L1CAMP32004 1257 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 EIF4A3P38919 411 aaKnown RBP4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 NOP2P46087 812 aaKnown RBP4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 CDSNQ15517 529 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 LRRFIP1Q32MZ4 808 aaKnown RBP4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 ERMP1Q7Z2K6 904 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 TICAM2Q86XR7 235 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 ZFPM1Q8IX07 1006 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 SH3RF3Q8TEJ3 882 aaPredicted RBP4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 PTCHD1Q96NR3 888 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 FCRL3Q96P31 734 aaPredicted RBP4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 PDCL3Q9H2J4 239 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 COPRSQ9NQ92 184 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 SUCOQ9UBS9 1254 aaKnown RBP4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 INVSQ9Y283 1065 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 TSC22D4Q9Y3Q8 395 aa4.82□□□□□ -1.64
CLNS1A-209ENST00000527299 SORBS3O60504 671 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 TBC1D8O95759 1140 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 KIAA2012Q0VF49 1180 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 RGL3Q3MIN7 710 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 ANKRD39Q53RE8 183 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 GK5Q6ZS86 529 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 USP48Q86UV5 1035 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 LGI4Q8N135 537 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 ZBTB8AQ96BR9 441 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 DHRS1Q96LJ7 313 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 IPO9Q96P70 1041 aaKnown RBP4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 RXFP1Q9HBX9 757 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 ST6GALNAC2Q9UJ37 374 aa4.81□□□□□ -1.64
CLNS1A-209ENST00000527299 RGS3P49796 1198 aa4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 ZNF445P59923 1031 aa4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 SLC9A5Q14940 896 aa4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 FAM26FQ5R3K3 315 aa4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 INTS3Q68E01 1043 aaKnown RBP4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 CCDC144CPQ8IYA2 1237 aa4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 SMAP1Q8IYB5 467 aaPredicted RBP4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 NETO2Q8NC67 525 aa4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 ZNF296Q8WUU4 475 aaPredicted RBP4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 PEX11GQ96HA9 241 aa4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 CCDC9Q9Y3X0 531 aaKnown RBP4.8□□□□□ -1.64
CLNS1A-209ENST00000527299 SMARCA5O60264 1052 aaPredicted RBP4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 FZD7O75084 574 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 ACRP10323 421 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 IFNGR1P15260 489 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 MMP14P50281 582 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 SMAD4Q13485 552 aaKnown RBP4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 SEZ6Q53EL9 994 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 UTP14CQ5TAP6 766 aaKnown RBP4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 GLB1LQ6UWU2 654 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 LIMS2Q7Z4I7 341 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 CABP7Q86V35 215 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 RGS22Q8NE09 1264 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 KISS1RQ969F8 398 aaPredicted RBP4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 DDX11Q96FC9 970 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 ZNF747Q9BV97 191 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 GP6Q9HCN6 339 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 FBLN5Q9UBX5 448 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 NUDT5Q9UKK9 219 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms