RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 A0A1W2PQD8 194 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 RFXAPO00287 272 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 AURKAO14965 403 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 VAMP4O75379 141 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 PPM1BO75688 479 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 TBC1D8O95759 1140 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 NAT2P11245 290 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 PI3P19957 117 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 C6orf15Q6UXA7 325 aaPredicted RBP5.82□□□□□ -1.48
CD44-219ENST00000525685 LDHDQ86WU2 507 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 FAM178BQ8IXR5 827 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 ARHGEF39Q8N4T4 335 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 ZNF513Q8N8E2 541 aaPredicted RBP5.82□□□□□ -1.48
CD44-219ENST00000525685 NLGN2Q8NFZ4 835 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 PANK1Q8TE04 598 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 MZB1Q8WU39 189 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 RCC1LQ96I51 464 aaKnown RBP5.82□□□□□ -1.48
CD44-219ENST00000525685 CGGBP1Q9UFW8 167 aaPredicted RBP5.82□□□□□ -1.48
CD44-219ENST00000525685 IRAK3Q9Y616 596 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 SRGAP3O43295 1099 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 MAPKAPK2P49137 400 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 CORO7P57737 925 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 RBL2Q08999 1139 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 GRB10Q13322 594 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 RAB33AQ14088 237 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 NR1I3Q14994 352 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 PLEKHN1Q494U1 663 aaPredicted RBP5.81□□□□□ -1.48
CD44-219ENST00000525685 NBPF6Q5VWK0 638 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 EEF1DP3Q658K8 133 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 TTLL10Q6ZVT0 673 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 IGDCC3Q8IVU1 814 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 NBPF4Q96M43 638 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 EPB41L4AQ9HCS5 686 aaPredicted RBP5.81□□□□□ -1.48
CD44-219ENST00000525685 PDLIM7Q9NR12 457 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 LRP2BPQ9P2M1 347 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 SUGT1Q9Y2Z0 365 aa5.81□□□□□ -1.48
CD44-219ENST00000525685 ANKRD34BA5PLL1 514 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 STXBP3O00186 592 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 KLF4O43474 513 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 DBHP09172 617 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 L1CAMP32004 1257 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 DDR2Q16832 855 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 DPY19L1Q2PZI1 675 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 TCERG1LQ5VWI1 586 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 TMEFF1Q8IYR6 380 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 SRPK1Q96SB4 655 aaKnown RBP5.8□□□□□ -1.48
CD44-219ENST00000525685 APBA2Q99767 749 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 ZSWIM4Q9H7M6 989 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 SIRPGQ9P1W8 387 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 APEX2Q9UBZ4 518 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 PCDHA5Q9Y5H7 936 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 BACE2Q9Y5Z0 518 aa5.8□□□□□ -1.48
CD44-219ENST00000525685 IRS2Q9Y4H2 1338 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 C2orf71A6NGG8 1288 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 KRTAP9-7A8MTY7 169 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 GJB6O95452 261 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 CYBBP04839 570 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 TACR1P25103 407 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 AMPD2Q01433 879 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 SV2CQ496J9 727 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 BICRALQ6AI39 1079 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 ZC3H14Q6PJT7 736 aaKnown RBP5.79□□□□□ -1.48
CD44-219ENST00000525685 PAQR3Q6TCH7 311 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 EEPD1Q7L9B9 569 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 TMEM151BQ8IW70 566 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 DACT3Q96B18 629 aaPredicted RBP5.79□□□□□ -1.48
CD44-219ENST00000525685 RAPGEFL1Q9UHV5 662 aa5.79□□□□□ -1.48
CD44-219ENST00000525685 A0A1W2PQJ5 194 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 B2RBV5 119 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 AGRPO00253 132 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 NOP56O00567 594 aaKnown RBP5.78□□□□□ -1.48
CD44-219ENST00000525685 INHBBP09529 407 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 SEPHS1P49903 392 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 NCKAP1LP55160 1127 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 EIF4G1Q04637 1599 aaKnown RBP5.78□□□□□ -1.48
CD44-219ENST00000525685 IFRD2Q12894 506 aaPredicted RBP5.78□□□□□ -1.48
CD44-219ENST00000525685 BMS1Q14692 1282 aaKnown RBP5.78□□□□□ -1.48
CD44-219ENST00000525685 NFE2L2Q16236 605 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 FAM129CQ86XR2 697 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 CELF2-AS1Q8N7Q2 184 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 MRFAP1L1Q96HT8 127 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 OSBPL2Q9H1P3 480 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 EMC9Q9Y3B6 208 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 HCFC2Q9Y5Z7 792 aa5.78□□□□□ -1.48
CD44-219ENST00000525685 BUB1BO60566 1050 aaPredicted RBP5.77□□□□□ -1.49
CD44-219ENST00000525685 GLI4P10075 376 aa5.77□□□□□ -1.49
CD44-219ENST00000525685 FBLN1P23142 703 aa5.77□□□□□ -1.49
CD44-219ENST00000525685 IGFBP6P24592 240 aaPredicted RBP5.77□□□□□ -1.49
CD44-219ENST00000525685 AFF3P51826 1226 aaKnown RBP5.77□□□□□ -1.49
CD44-219ENST00000525685 ZNF143P52747 638 aaPredicted RBP5.77□□□□□ -1.49
CD44-219ENST00000525685 ZNF200P98182 395 aaPredicted RBP5.77□□□□□ -1.49
CD44-219ENST00000525685 DPH6Q7L8W6 267 aa5.77□□□□□ -1.49
CD44-219ENST00000525685 MICAL1Q8TDZ2 1067 aa5.77□□□□□ -1.49
CD44-219ENST00000525685 LNPKQ9C0E8 428 aa5.77□□□□□ -1.49
CD44-219ENST00000525685 FBLN5Q9UBX5 448 aa5.77□□□□□ -1.49
CD44-219ENST00000525685 AKT3Q9Y243 479 aa5.77□□□□□ -1.49
CD44-219ENST00000525685 TRIM13O60858 407 aa5.76□□□□□ -1.49
CD44-219ENST00000525685 PPP1R11O60927 126 aaPredicted RBP5.76□□□□□ -1.49
CD44-219ENST00000525685 BMP7P18075 431 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms