RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 RAB6BQ9NRW1 208 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 TOPORSQ9NS56 1045 aaPredicted RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 MAFFQ9ULX9 164 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 CRYL1Q9Y2S2 319 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 HRH3Q9Y5N1 445 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 LTBP3Q9NS15 1303 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 SYNDIG1LA6NDD5 238 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 RASA4BC9J798 803 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 RASA4O43374 803 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 PAGE1O75459 146 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 TIPRLO75663 272 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 IL33O95760 270 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 IL6STP40189 918 aaPredicted RBP5.23□□□□□ -1.57
CD44-213ENST00000525209 CTSOP43234 321 aaPredicted RBP5.23□□□□□ -1.57
CD44-213ENST00000525209 IDH3AP50213 366 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 TNFAIP2Q03169 654 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 GRM1Q13255 1194 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 HSP90AA2PQ14568 343 aaPredicted RBP5.23□□□□□ -1.57
CD44-213ENST00000525209 HIF1AQ16665 826 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 PLA2G4EQ3MJ16 856 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 CFAP100Q494V2 611 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 RRP12Q5JTH9 1297 aaKnown RBP5.23□□□□□ -1.57
CD44-213ENST00000525209 IER5Q5VY09 327 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 SLC6A19Q695T7 634 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 KIAA1211LQ6NV74 962 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 PLBD1Q6P4A8 553 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 ARL10Q8N8L6 244 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 GSTCDQ8NEC7 633 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 VMP1Q96GC9 406 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 UBXN10Q96LJ8 280 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 FAM193BQ96PV7 902 aaPredicted RBP5.23□□□□□ -1.57
CD44-213ENST00000525209 SPAG5Q96R06 1193 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 AARSD1Q9BTE6 412 aaKnown RBP5.23□□□□□ -1.57
CD44-213ENST00000525209 LSM14BQ9BX40 385 aaKnown RBP5.23□□□□□ -1.57
CD44-213ENST00000525209 MRPL9Q9BYD2 267 aaKnown RBP5.23□□□□□ -1.57
CD44-213ENST00000525209 RNF38Q9H0F5 515 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 LMAN2LQ9H0V9 348 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 PHAXQ9H814 394 aaKnown RBP5.23□□□□□ -1.57
CD44-213ENST00000525209 PLEKHA5Q9HAU0 1116 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 ARFGAP3Q9NP61 516 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 USP20Q9Y2K6 914 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 TMEM98Q9Y2Y6 226 aa5.23□□□□□ -1.57
CD44-213ENST00000525209 RTCBQ9Y3I0 505 aaKnown RBP5.23□□□□□ -1.57
CD44-213ENST00000525209 RRN3P2A6NIE6 340 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 SPINT1O43278 529 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 AP1G1O43747 822 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 PQBP1O60828 265 aaKnown RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 CYP11A1P05108 521 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 C6orf222P0C671 652 aaPredicted RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 EDN3P14138 238 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 FOSL1P15407 271 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 CES1P23141 567 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 INPP5BP32019 993 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 CTNNA1P35221 906 aaKnown RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 ADD1P35611 737 aaKnown RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 IGFALSP35858 605 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 ARSDP51689 593 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 COPAP53621 1224 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 BPIFB3P59826 476 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 PLIN5Q00G26 463 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 PTSQ03393 145 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 DHX9Q08211 1270 aaKnown RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 ZNF252P-AS1Q0IIN9 211 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 ZYXQ15942 572 aaKnown RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.22□□□□□ -1.57
CD44-213ENST00000525209 RGL3Q3MIN7 710 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 SLC45A4Q5BKX6 768 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 RILPL1Q5EBL4 403 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 DGKKQ5KSL6 1271 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 IFIT1BQ5T764 474 aaKnown RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 DIEXFQ68CQ4 756 aaKnown RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 CDCA2Q69YH5 1023 aaPredicted RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 ITPRIPL1Q6GPH6 555 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 NBPF10Q6P3W6 841 aaKnown RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 ZNF449Q6P9G9 518 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 UNC5AQ6ZN44 842 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 ANKLE2Q86XL3 938 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 COLGALT2Q8IYK4 626 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 CMTR1Q8N1G2 835 aaKnown RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 TEX9Q8N6V9 391 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 FLCNQ8NFG4 579 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 KLHL6Q8WZ60 621 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 TCF12Q99081 682 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 TBCBQ99426 244 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 ORAI3Q9BRQ5 295 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 TSPY26PQ9H489 355 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 SLC52A2Q9HAB3 445 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 LIN7BQ9HAP6 207 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 VTA1Q9NP79 307 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 MRGBPQ9NV56 204 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 ABI2Q9NYB9 513 aaPredicted RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 GIMAP2Q9UG22 337 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 NDOR1Q9UHB4 597 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 PCDHB10Q9UN67 800 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 POLR3KQ9Y2Y1 108 aaPredicted RBP5.22□□□□□ -1.57
CD44-213ENST00000525209 SNCAIPQ9Y6H5 919 aa5.22□□□□□ -1.57
CD44-213ENST00000525209 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 LILRA1O75019 489 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 EFCAB14O75071 495 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 CFBP00751 764 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms