RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 MCM3P25205 808 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 MTIF2P46199 727 aaKnown RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 NOVP48745 357 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 CDK8P49336 464 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 KCNQ4P56696 695 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 VSNL1P62760 191 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 AMPD3Q01432 767 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 TXNRD1Q16881 649 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 LETM2Q2VYF4 491 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 MUM1L1Q5H9M0 696 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 CCDC122Q5T0U0 273 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 FKBP15Q5T1M5 1219 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 PPP1R18Q6NYC8 613 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 WDR93Q6P2C0 686 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 WDR59Q6PJI9 974 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 SMIM5Q71RC9 77 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 ZSCAN29Q8IWY8 852 aaPredicted RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 CCDC170Q8IYT3 715 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 REXO1Q8N1G1 1221 aaKnown RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 CCDC24Q8N4L8 307 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 CNBD1Q8NA66 436 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 NOA1Q8NC60 698 aaKnown RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 EXOC4Q96A65 974 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 CALML4Q96GE6 196 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 RPGRIP1Q96KN7 1286 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 PURBQ96QR8 312 aaKnown RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 PLIN2Q99541 437 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 EIF3CQ99613 913 aaKnown RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 TUBGCP2Q9BSJ2 902 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 TSGA10Q9BZW7 698 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 ZNHIT6Q9NWK9 470 aaKnown RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 PSD3Q9NYI0 1048 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 ANKIB1Q9P2G1 1089 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 TRIM10Q9UDY6 481 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 CCNL1Q9UK58 526 aaPredicted RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 GUCA1BQ9UMX6 200 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 GPR75-ASB3A0A0A6YYF3 556 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 SMCO2A6NFE2 343 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 KRT86O43790 486 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 CCNT1O60563 726 aaKnown RBP9.96□□□□□ -0.82
PKP3-202ENST00000524646 ABL1P00519 1130 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 TFRCP02786 760 aaKnown RBP9.96□□□□□ -0.82
PKP3-202ENST00000524646 RHOXF2BP0C7M4 288 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 GOLGA8HP0CJ92 632 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 TRIM21P19474 475 aaKnown RBP9.96□□□□□ -0.82
PKP3-202ENST00000524646 FXR2P51116 673 aaKnown RBP eCLIP9.96□□□□□ -0.826e-8■□□□□ 9
PKP3-202ENST00000524646 USP14P54578 494 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 TMEM266Q2M3C6 531 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 ASPRV1Q53RT3 343 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 MIIPQ5JXC2 388 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 PAPD7Q5XG87 772 aaKnown RBP9.96□□□□□ -0.82
PKP3-202ENST00000524646 NCAPH2Q6IBW4 605 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 FOXR2Q6PJQ5 311 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 POTEDQ86YR6 584 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 FNBP4Q8N3X1 1017 aaPredicted RBP9.96□□□□□ -0.82
PKP3-202ENST00000524646 KIAA0895Q8NCT3 520 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 NEK11Q8NG66 645 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 RHOXF2Q9BQY4 288 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 MMTAG2Q9BU76 263 aaKnown RBP9.96□□□□□ -0.82
PKP3-202ENST00000524646 ABCB6Q9NP58 842 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 MTMR7Q9Y216 660 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 SLX4Q8IY92 1834 aa9.96□□□□□ -0.82
PKP3-202ENST00000524646 TARSL2A2RTX5 802 aaKnown RBP9.95□□□□□ -0.82
PKP3-202ENST00000524646 UFL1O94874 794 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 ATP1A1P05023 1023 aaKnown RBP9.95□□□□□ -0.82
PKP3-202ENST00000524646 IL1R1P14778 569 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 ATP2B4P23634 1241 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 ADCY7P51828 1080 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 VAV2P52735 878 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 ST5P78524 1137 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 GPSM2P81274 684 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 TBC1D8BQ0IIM8 1120 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 GRB10Q13322 594 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 CASP8Q14790 479 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 NFIXQ14938 502 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 CALCRLQ16602 461 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 MAN2A1Q16706 1144 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 MAP9Q49MG5 647 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 TMEM119Q4V9L6 283 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 ANKRD40Q6AI12 368 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 IQCEQ6IPM2 695 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 UNC13DQ70J99 1090 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 SLC51AQ86UW1 340 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 SLF2Q8IX21 1173 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 FAM71BQ8TC56 605 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 TBCKQ8TEA7 893 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 ARHGEF1Q92888 912 aaKnown RBP9.95□□□□□ -0.82
PKP3-202ENST00000524646 PCMTD1Q96MG8 357 aaPredicted RBP9.95□□□□□ -0.82
PKP3-202ENST00000524646 NOC4LQ9BVI4 516 aaKnown RBP9.95□□□□□ -0.82
PKP3-202ENST00000524646 PDE11AQ9HCR9 933 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 L1RE1Q9UN81 338 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 SAR1BQ9Y6B6 198 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 MYO3BQ8WXR4 1341 aa9.95□□□□□ -0.82
PKP3-202ENST00000524646 PVALEFA0A1B0GWK0 134 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 RASSF10A6NK89 507 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 FGFR1OPO95684 399 aaKnown RBP9.94□□□□□ -0.82
PKP3-202ENST00000524646 FCER1AP12319 257 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 HNRNPH3P31942 346 aaKnown RBP9.94□□□□□ -0.82
PKP3-202ENST00000524646 KLK7P49862 253 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 RHBDL3P58872 404 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms