RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FCRL2Q96LA5 508 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 DNAJC7Q99615 494 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 CDADC1Q9BWV3 514 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 ADAMTS10Q9H324 1103 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 KCNK12Q9HB15 430 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 TNFRSF10DQ9UBN6 386 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 BACE2Q9Y5Z0 518 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 DNAJC25-GNG10A0A024R161 153 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 TRBV23OR9-2A0A075B6M9 112 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 TMEM82A0PJX8 343 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 C2orf71A6NGG8 1288 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 AKAP8O43823 692 aaKnown RBP4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 IGSF3O75054 1194 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 VAMP4O75379 141 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 CPP00450 1065 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 SCG5P05408 212 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 ZGLP1P0C6A0 271 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 FGFR1P11362 822 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 KIR2DL1P43626 348 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 KIR2DL2P43627 348 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 SEPHS1P49903 392 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 PPP2R2AP63151 447 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 CHRNEQ04844 493 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 TCERG1LQ5VWI1 586 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 SPATC1Q76KD6 591 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 OXR1Q8N573 874 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 PDZD8Q8NEN9 1154 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 MAP6Q96JE9 813 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 AARSD1Q9BTE6 412 aaKnown RBP4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 AP5S1Q9NUS5 200 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 MYRFQ9Y2G1 1151 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 GPR55Q9Y2T6 319 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 KDM2BQ8NHM5 1336 aa4.95□□□□□ -1.62
HMGB1P41-201ENST00000520234 TRAV20A0A0B4J274 112 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 FITM1A5D6W6 292 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 STXBP3O00186 592 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 FGF10O15520 208 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 TRIM13O60858 407 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 TBC1D8O95759 1140 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 RAC2P15153 192 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 IFNGR1P15260 489 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 EFEMP1Q12805 493 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 PUM1Q14671 1186 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 DPY19L1Q2PZI1 675 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 RALGPS1Q5JS13 557 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 HLA-DQA1Q5Y7H0 255 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 NAT16Q8N8M0 369 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 JMYQ8N9B5 988 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 ZBTB38Q8NAP3 1195 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 THAP3Q8WTV1 239 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 BTN2A2Q8WVV5 523 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 COPS5Q92905 334 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 PTCHD1Q96NR3 888 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 MCMBPQ9BTE3 642 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 G6PC3Q9BUM1 346 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 XYLT2Q9H1B5 865 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 ARHGEF4Q9NR80 690 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 C19orf73Q9NVV2 129 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 ERVK13-1Q9NX77 482 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 PFDN2Q9UHV9 154 aa4.94□□□□□ -1.62
HMGB1P41-201ENST00000520234 A0A1W2PQ45 241 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 A0A1W2PQY0 241 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 TBX1O43435 398 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 ADCY3O60266 1144 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 DIAPH1O60610 1272 aaKnown RBP4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 SNRPB2P08579 225 aaKnown RBP4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 GFRA1P56159 465 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 SCRN1Q12765 414 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 MAP4K2Q12851 820 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 NR0B2Q15466 257 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 IQCEQ6IPM2 695 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 KCTD13Q8WZ19 329 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 IPO9Q96P70 1041 aaKnown RBP4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 LGR4Q9BXB1 951 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 PIF1Q9H611 641 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 WDR26Q9H7D7 661 aa4.93□□□□□ -1.62
HMGB1P41-201ENST00000520234 CCDC163A0A0D9SF12 145 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 FADS2P1A8MWK0 482 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 SASH1O94885 1247 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 HPXP02790 462 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 PABPC1P11940 636 aaKnown RBP4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 INSRRP14616 1297 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 PAMP19021 973 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 KCNJ6P48051 423 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 HK2P52789 917 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 SNX17Q15036 470 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 TESK1Q15569 626 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 SLC14A2Q15849 920 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 C2orf27AQ580R0 203 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 E4F1Q66K89 784 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 NSMFQ6X4W1 530 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 ZPBP2Q6X784 338 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 SCUBE1Q8IWY4 988 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 LILRA2Q8N149 483 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 ZSWIM2Q8NEG5 633 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 NPLOC4Q8TAT6 608 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 HHIPL1Q96JK4 782 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 CDC6Q99741 560 aa4.92□□□□□ -1.62
HMGB1P41-201ENST00000520234 NPHP3-ACAD11A0A0J9YXS1 232 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 WTIPA6NIX2 430 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms